Gene Mpe_A3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3519 
Symbol 
ID4786222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3729810 
End bp3730463 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content75% 
IMG OID640092100 
Productputative transmembrane protein 
Protein accessionYP_001022707 
Protein GI124268703 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.376763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCTC CCAGCCTCCT GCCAGACCCC GCCGTGCCCG CCGCGCTGCT GCAGGGCGCG 
CTGATGATGG GCGGCCTGAT CGTCGCGATC GGCGCCCAGA ACGCCCTGGT GCTGCGCCAG
GGCGTGATGC GCGCGCACGT GCTGCCGGTG GTGCTGCTCT GCACGCTGTC GGACTGGCTG
CTGGTGGCGC TGGGCGTGTT CGGCCTCGGG GCGCTGATCG CCGCGCAGCC GCTGCTGCTG
GAAGCCTTCC GCTACGGCGG TGCGGCCTTC CTGGTGGCCT ACGGCTGGCG CGCCGCGCGC
CAGGCCTGGC AGGGCTCGGC CGCCGGGCTG CAGCTCGCCG CCGGCGGCGG CTCGCTCGGC
GGCGCGCTGA GCACCACGCT CGCGCTCACC TACCTGAATC CGCACGTCTA TCTGGACACC
GTGGTGCTGG TCGGCGGCGT CGGCGCCCAG CACGCCGGTG CGGCGCAGCT GGGCTTCGTG
GCCGGCGCCT GGCTGGCGTC GGCGGCGTGG TTCGCGCTGC TCGGTTTCGG CGCGGTCGGC
GCGGCGCGCT TCCTGCGCCA GCCGGCCGCA TGGCGGGCGA TCGACGCACT GGTCGCCGTG
GTGATGTGGG CGGTCGCGGC GCAGTTGCTG CTGACGCCGC TGAAGCAGGC TTGA
 
Protein sequence
MLSPSLLPDP AVPAALLQGA LMMGGLIVAI GAQNALVLRQ GVMRAHVLPV VLLCTLSDWL 
LVALGVFGLG ALIAAQPLLL EAFRYGGAAF LVAYGWRAAR QAWQGSAAGL QLAAGGGSLG
GALSTTLALT YLNPHVYLDT VVLVGGVGAQ HAGAAQLGFV AGAWLASAAW FALLGFGAVG
AARFLRQPAA WRAIDALVAV VMWAVAAQLL LTPLKQA