Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3519 |
Symbol | |
ID | 4786222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 3729810 |
End bp | 3730463 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640092100 |
Product | putative transmembrane protein |
Protein accession | YP_001022707 |
Protein GI | 124268703 |
COG category | [R] General function prediction only |
COG ID | [COG1279] Lysine efflux permease |
TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.376763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCTC CCAGCCTCCT GCCAGACCCC GCCGTGCCCG CCGCGCTGCT GCAGGGCGCG CTGATGATGG GCGGCCTGAT CGTCGCGATC GGCGCCCAGA ACGCCCTGGT GCTGCGCCAG GGCGTGATGC GCGCGCACGT GCTGCCGGTG GTGCTGCTCT GCACGCTGTC GGACTGGCTG CTGGTGGCGC TGGGCGTGTT CGGCCTCGGG GCGCTGATCG CCGCGCAGCC GCTGCTGCTG GAAGCCTTCC GCTACGGCGG TGCGGCCTTC CTGGTGGCCT ACGGCTGGCG CGCCGCGCGC CAGGCCTGGC AGGGCTCGGC CGCCGGGCTG CAGCTCGCCG CCGGCGGCGG CTCGCTCGGC GGCGCGCTGA GCACCACGCT CGCGCTCACC TACCTGAATC CGCACGTCTA TCTGGACACC GTGGTGCTGG TCGGCGGCGT CGGCGCCCAG CACGCCGGTG CGGCGCAGCT GGGCTTCGTG GCCGGCGCCT GGCTGGCGTC GGCGGCGTGG TTCGCGCTGC TCGGTTTCGG CGCGGTCGGC GCGGCGCGCT TCCTGCGCCA GCCGGCCGCA TGGCGGGCGA TCGACGCACT GGTCGCCGTG GTGATGTGGG CGGTCGCGGC GCAGTTGCTG CTGACGCCGC TGAAGCAGGC TTGA
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Protein sequence | MLSPSLLPDP AVPAALLQGA LMMGGLIVAI GAQNALVLRQ GVMRAHVLPV VLLCTLSDWL LVALGVFGLG ALIAAQPLLL EAFRYGGAAF LVAYGWRAAR QAWQGSAAGL QLAAGGGSLG GALSTTLALT YLNPHVYLDT VVLVGGVGAQ HAGAAQLGFV AGAWLASAAW FALLGFGAVG AARFLRQPAA WRAIDALVAV VMWAVAAQLL LTPLKQA
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