| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3504 |
|---|
| Symbol | |
|---|
| ID | 4786266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3714358 |
|---|
| End bp | 3714936 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640092085 |
|---|
| Product | NUDIX domain-containing protein |
|---|
| Protein accession | YP_001022692 |
|---|
| Protein GI | 124268688 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.433269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGCGC GGATCGAGCG CGCGGCCGCG CGCTTCTGGG GCACGCTGAC CTTCGGCGCG
CATGCCAACG GCTACGTCGC CGGGCCCGAC GGCCGCCCGA GCCACCTGTG GATCGCACAG
CGCTCGCCGC ACAAGCCCAC CGACCCCGGC AAGTTCGACA ACCTGATCGG CGGTGGCGTG
CCGCACGGCC AGACGCCGTT CGAGACGCTG GTGCGCGAAG GCTGGGAAGA GGCGGGCCTG
GCCGCCGACC TCGTGCGCCG GGCCACGCGC GGCCGGGTCA TCGACCTGCA GCGGGCGCTG
CCCGACTGCG CCGGCCACGG CCTGCAGCGC GAGCAGCTGT TCGTCTACGA CCTGGCGCTG
CCGCCCGGCG TGCAGCCGTG CAACCAGGAC GGCGAGGTCG CCTCGCTGCA ATTGCTGCCG
GTGGCCGAGG CGCTGGCACT GGCGGGCGGC GACACGATGA CGGTCGATGC CGCGCTGGCG
ACGCTGGATT TCGCGCTGCG CTGGCGACTC CTCGGGGAGC GCGAGCATGC CGCGCTCACG
GCGCGCACGG CCGGGCTGTT CGGCGCAATG CCGGACTGA
|
|---|
| Protein sequence | MLARIERAAA RFWGTLTFGA HANGYVAGPD GRPSHLWIAQ RSPHKPTDPG KFDNLIGGGV
PHGQTPFETL VREGWEEAGL AADLVRRATR GRVIDLQRAL PDCAGHGLQR EQLFVYDLAL
PPGVQPCNQD GEVASLQLLP VAEALALAGG DTMTVDAALA TLDFALRWRL LGEREHAALT
ARTAGLFGAM PD
|
|---|
| |