| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3479 |
|---|
| Symbol | |
|---|
| ID | 4786241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3690227 |
|---|
| End bp | 3690709 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640092060 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001022667 |
|---|
| Protein GI | 124268663 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.854167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAG TCACCCGCCC CGCCAACGAG AAAGGCGAGT TCCTCGTCGA CTACGAAGAG
AAGGTCTTCG AGGACGTGAA GGCCGCCCCG GGCGAGAAGG CCCTGGTCAC CTTCCACACC
GTCGCCTTCG AAGGCTCGAT CGGCTTCGTC AACCTGCTGC AGGCCACGCG GCTGCAGCGC
AAGGGCTTCG AGACCTCGGT GCTGCTCTAC GGCCCCGGCG TGACGCTGGG TGTCAAGCGC
GGCTTCCCGA CGCTCGGCGA CGAGGCCTTC CCCGGTCACC AGAACTTCAA CAACCAGATC
GCCAAGTTCA TCGCCGAGGG CGGGAAGGTC TACGCCTGCC GCTTCGCGCT GCAGGCGCTC
TACGGCCACG GCGAGGGCGC GCTGATCGAG GGCATCCGCC CGATCAGTCC GCTGGACGTG
CTGGACATCA TCCTGCTGCA CCGCAAGGCC GACGCCTTCA TCCTCGACAC CTGGACACTT
TGA
|
|---|
| Protein sequence | MPKVTRPANE KGEFLVDYEE KVFEDVKAAP GEKALVTFHT VAFEGSIGFV NLLQATRLQR
KGFETSVLLY GPGVTLGVKR GFPTLGDEAF PGHQNFNNQI AKFIAEGGKV YACRFALQAL
YGHGEGALIE GIRPISPLDV LDIILLHRKA DAFILDTWTL
|
|---|
| |