| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3467 |
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| Symbol | |
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| ID | 4786285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3677154 |
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| End bp | 3678761 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640092047 |
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| Product | Flp pilus assembly protein TadD |
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| Protein accession | YP_001022655 |
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| Protein GI | 124268651 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR02466] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAC CCGCCCCCCG CTCCGCACGC GGCCCCCACC CGGCCGAGGT GAACGCCGTG
CTCGCGCACT GCCAGGCCGG CCGCTGGCCG GAGGCAGAGA CCGCAGCGGC GCGGCTGTTG
AAGAGCCACC CGCAGGATGC GGCCCTGCAC AACCTGCACG GCACGGCCTG CTCGGAACAG
CACAAGCTCG ACGCCGCGGC GGCCAGCTTC CGCCGGGCGG CGGCGCTGGC GCCGCAGTCG
GCCGAACTGC TGTTCAACCT GGCCGCCACC TGCGGCCGCC TGGGCCGGCT CGACGAGGCC
GTGGCCGCCT ACCGGCGGTC CGTCGCGCTG AAGCCCGACT TCGCGGTGGC GCACTACAAC
CTCGGCACCG CGCTCAAGGA TTTGCAGCAG CTCGACGAGG CCGTCACCAG CCTGCGGCGC
GCGGTGGCGC TGCAGCCGGG CTACGCCGCC GCGCACGCGA ACCTCGGCGC CGTGCGCCAG
GCCCAGGGCC ATCTCGACGA CGCCATCGCG TGCTACCGCG CCGCGCTGGC GATCACGCCC
ACCGCCCGGG CGCACCTGAG CCTCGCCTCG GCGCTGCGTG CGCACGGCCT GCTCGACGCC
GCGGCCGCCA GCCTGCGTGA CGCGCTCGCG CTCGACCCGG CCTACGCCGA CGCCCACAAC
AATCTCGGCG AGACGCTGTG GGACCAGGGC CGTGTCGACG ATGCGCTGGC CAGCTACCGC
GCCGCACACC GCCTCGATCC CGCGCACCCC GAGGCCAACC ACAACCTCGG CGTCCTGCTC
CAGGCCGCCG GGCAATGGGG CGATGCCATC GCCTGCTTCG AGCGTTCGCA GCTGCGCGAC
TGGCAGGAGC GGCGCCTCTA CTGCCTGTAC AAGACCGAGC GCTACGCCGA GTTCCGCGCC
GCGCTGGCGC CGATGCTGTC CGCCAGCCCG CACCGCTCGC CCTTTCTCGC CACGCTGTCG
GCGCACCACG CCGCGAACTT CGCCGAACCC GACCCCTACG GTTTCTGCCG CACGCCGCTC
GATTTCGTGC AGCATGCCCG CATCGACGCG TTGGCCGCGC CGGGCAGCGC CCTCGTCACC
GAGTTGCTGC GCGACATCGA ACACGCCGAG ATCGCCGAAC GCAAGCAGGG CCGGCTGCAC
CACGGCATCC AGTCGGCCGG CAACCTGTTC AAGCGCCCCG AGGACTCGTT CCGCCGCCTC
GCGGCGCTGA TCGGGCAGGC GGTCGTCGCC TACCGCGCGA AGTGGGCCGG CGCCGATTGC
GAGTACGCGC GCGCCTTCCC CGCCGACCCG GTGTTCAGCA GCTCGTGGTA CGTGAAGATG
CGGCAGGGCG GCCACCTCAC CTCGCACATC CACGAGACCG GCTGGCTGAG CGGCGTGGTG
TACCTGGCAC TGCCGCCGCG CGCCGAGGGC AGCGACGACG GCTGCATCGA GTTCAGCACC
GACGGCGACG GTTATCCGCG CCGGCACGAG CACTTCCCGC GCCGGGTGCT GGCGCCTCAG
GTCGGCGACC TGGTGCTGTT CCCGTCGTCG CTGTTCCACC GCACGCTGCC GTTCCGCGCC
GACGCCGACC GCGTGTGCAT CGCCTTCGAT ATCGCGCCCG GTCCCTAG
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| Protein sequence | MQRPAPRSAR GPHPAEVNAV LAHCQAGRWP EAETAAARLL KSHPQDAALH NLHGTACSEQ
HKLDAAAASF RRAAALAPQS AELLFNLAAT CGRLGRLDEA VAAYRRSVAL KPDFAVAHYN
LGTALKDLQQ LDEAVTSLRR AVALQPGYAA AHANLGAVRQ AQGHLDDAIA CYRAALAITP
TARAHLSLAS ALRAHGLLDA AAASLRDALA LDPAYADAHN NLGETLWDQG RVDDALASYR
AAHRLDPAHP EANHNLGVLL QAAGQWGDAI ACFERSQLRD WQERRLYCLY KTERYAEFRA
ALAPMLSASP HRSPFLATLS AHHAANFAEP DPYGFCRTPL DFVQHARIDA LAAPGSALVT
ELLRDIEHAE IAERKQGRLH HGIQSAGNLF KRPEDSFRRL AALIGQAVVA YRAKWAGADC
EYARAFPADP VFSSSWYVKM RQGGHLTSHI HETGWLSGVV YLALPPRAEG SDDGCIEFST
DGDGYPRRHE HFPRRVLAPQ VGDLVLFPSS LFHRTLPFRA DADRVCIAFD IAPGP
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