Gene Mpe_A3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3460 
Symbol 
ID4786278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3669829 
End bp3670632 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content72% 
IMG OID640092040 
Productindole-3-glycerol phosphate synthase 
Protein accessionYP_001022648 
Protein GI124268644 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.860463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.18397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCG AAGACATCCT GCAGAAGATC GTCGCGGTCA AGCGGGACGA GATCGTGGCC 
GCGCGCAAGC GGCGCTCCCT TGCCTCGCTG CGCGCCGACG CAGAGTCGGC CGAACGGCGC
GCCGACCTGC GCGACTTCAC CGGCGCGCTG CGCGGGTGCG TCGCGGCCGG CCGGCCGGCG
GTGATCGCCG AGGTCAAGAA GGCCAGCCCG AGCAAGGGCG TGCTGCGCGA GCACTTCGTG
CCGGCGGCGA TCGCCGAGAG CTACGCCCGC CACGGCGCGG CCTGCCTGTC GGTGCTGACC
GACGAGCGCT TCTTCCAGGG CTCGGTCGAC TACCTGTTGG CCGCCCGCGC CGCCTGCCCG
CTGCCGGTGC TGCGCAAGGA CTTCATGGTC GACGACTACC AGGTGTTCGA GGCGCGCGAG
ATGGGTGCCG ACTGCATCCT GCTGATCGCC GCCTGCCTGG CCGACGCCCA GATGGCCGAC
CTGGAAGCGG TGGCGCAGGC GATCGGCCTG GCGGTGCTGG TCGAGGTGCA CGACGGCGCC
GAACTCGACC GCGCGCTGCG GCTGAAGACT CCGCTGGTCG GCATCAACAA CCGCAACCTG
CGGACCTTCG AGGTCACGCT CGACACCACG CTGGGCCTGT TGCCGCGCGT GCCGCCGGAC
CGCCTGCTGG TGACCGAGAG CGGCATCCTC GCTCCGGCCG ACGTGCGGCG CATGCGCGAG
GCCCAGGTGC ACGCCTTCCT GGTCGGCGAA GCCTTCATGC GCGCGCCCGA TCCCGGCTTG
GCGCTGGCCG CGCTGTTCGG CTGA
 
Protein sequence
MSGEDILQKI VAVKRDEIVA ARKRRSLASL RADAESAERR ADLRDFTGAL RGCVAAGRPA 
VIAEVKKASP SKGVLREHFV PAAIAESYAR HGAACLSVLT DERFFQGSVD YLLAARAACP
LPVLRKDFMV DDYQVFEARE MGADCILLIA ACLADAQMAD LEAVAQAIGL AVLVEVHDGA
ELDRALRLKT PLVGINNRNL RTFEVTLDTT LGLLPRVPPD RLLVTESGIL APADVRRMRE
AQVHAFLVGE AFMRAPDPGL ALAALFG