| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3445 |
|---|
| Symbol | |
|---|
| ID | 4786319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3649640 |
|---|
| End bp | 3650830 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640092023 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_001022633 |
|---|
| Protein GI | 124268629 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00653639 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.407086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA GCAAATTCGA GCGGACCAAG CCGCACGTGA ACGTTGGGAC GATTGGGCAC
GTGGACCACG GGAAGACGAC GCTGACGGCG GCGATCACGA CGATTCTGTC GTCGAAGTTC
GGTGGTGAGG CCAAGGCGTA CGACCAGATC GACGCGGCGC CCGAAGAGAA GGCGCGCGGC
ATCACGATCA ACACGGCGCA CGTTGAGTAC GAGACCGCCA ACCGGCACTA CGCGCACGTT
GACTGCCCCG GACACGCCGA CTACGTGAAG AACATGATCA CGGGTGCGGC GCAGATGGAC
GGCGCCATCC TCGTGTGCTC GGCCGCCGAC GGCCCGATGC CCCAGACCCG CGAGCACATC
CTGCTGGCCC GTCAGGTCGG CGTGCCCTAC ATCATCGTCT TCCTGAACAA GTGCGACATG
GTCGACGACG CCGAGCTCCT CGAGCTGGTG GAGATGGAAG TGCGCGAACT GCTCGACAAG
TACGAGTTCC CCGGTGACGC CACCCCCATC GTCCACGGCT CGGCCAAGCT CGCCCTCGAA
GGCGACAAGG GCGAACTCGG CGAACAAGCC ATCATGAAGC TGGCCGAAGC CCTCGACAGC
TACATCCCCA CGCCCGAGCG TGCGGTGGAC GGCGCCTTCC TGATGCCGGT GGAAGACGTG
TTCTCCATCT CCGGGCGCGG CACCGTCGTC ACCGGCCGTG TCGAACGCGG CATCATCAAG
GTCGGCGAGG AAATCGAGAT CGTCGGCATC AGCGCCACGC AGAAGACCAC CTGCACCGGC
GTCGAGATGT TCCGCAAGCT GCTCGACCAG GGTCAGGCGG GCGACAACGT CGGCATCCTG
CTGCGCGGCA CCAAGCGCGA AGACGTGCAG CGCGGCCAGG TGCTGTGCAA GCCCGGCTCG
GTCAAGCCGC ACACCCACTT CACCGCCGAG ATCTACGTCC TGAGCAAGGA AGAGGGCGGC
CGACACACGC CGTTCTTCAA CAACTACCGT CCCCAGTTCT ACTTCCGCAC GACGGACGTG
ACGGGCGCGG TGGAGTTGCC CAAGGACAAG GAGATGGTGA TGCCGGGCGA CAACGTGAGC
ATCACGGTCA AGCTGATCAA CCCGATCGCG ATGGAAGAAG GCCTGCGCTT CGCCATCCGT
GAGGGCGGCC GCACCGTCGG CGCAGGCGTC GTCGCCAAAA TCATCGAGTA A
|
|---|
| Protein sequence | MAKSKFERTK PHVNVGTIGH VDHGKTTLTA AITTILSSKF GGEAKAYDQI DAAPEEKARG
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLDK YEFPGDATPI VHGSAKLALE
GDKGELGEQA IMKLAEALDS YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRVERGIIK
VGEEIEIVGI SATQKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVQ RGQVLCKPGS
VKPHTHFTAE IYVLSKEEGG RHTPFFNNYR PQFYFRTTDV TGAVELPKDK EMVMPGDNVS
ITVKLINPIA MEEGLRFAIR EGGRTVGAGV VAKIIE
|
|---|
| |