| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3444 |
|---|
| Symbol | rpsJ |
|---|
| ID | 4786318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3649239 |
|---|
| End bp | 3649550 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640092022 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_001022632 |
|---|
| Protein GI | 124268628 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000018475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.343621 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGC AAAAGATCCG CATCCGCCTG AAGGCATTCG ATTACAAGCT GATCGATCAA
TCGGCCCTCG AGATCGTCGA CACCGCCAAG CGCACCGGCG CCATCGTCAA GGGCCCGGTG
CCCCTGCCGA CACGCATGCA GCGTTTCGAC ATCCTGCGTT CGCCGCACGT CAACAAGAGC
TCGCGCGACC AGTTCGAGAT CCGCACCCAC CAGCGCCTGA TGGACATCGT CGATCCCACC
GACAAGACCG TCGACGCGCT GATGAAGCTT GACCTGCCGG CCGGCGTGGA CGTCGAGATC
AAGCTGCAGT AA
|
|---|
| Protein sequence | MQKQKIRIRL KAFDYKLIDQ SALEIVDTAK RTGAIVKGPV PLPTRMQRFD ILRSPHVNKS
SRDQFEIRTH QRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
|
|---|
| |