Gene Mpe_A3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3443 
SymbolrplC 
ID4786317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3648372 
End bp3649115 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID640092021 
Product50S ribosomal protein L3 
Protein accessionYP_001022631 
Protein GI124268627 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000129848 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.388921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGG TCGCCTCAGT GAAGTCAGTC CGACCAATCG ATGTCGGACA TTGGAGAAGA 
ACCATGACTA CAGCCAATCC GGGCGATCGC CTCGGCTTGC TGGGCCGCAA GGTGGGCATG
ATGCGCATCT TCACGGACGA CGGCGACGCC GTGCCCGTGA CGGTGCTTGA CGTGTCCAAC
AATCGCGTCA CCCAGGTCAA GACCGTCGAA ACCGACGGCT ACAGCGCCAT CCAGGTGACA
TTTGGCGCCC GCAAGGCGTC GCGCGTCACG AAGCCAGAGG CCGGGCATCT CGCCAAGGCG
GGTGTCGAGG CTGGCGAAAT CCTGCGTGAA TTCGCGGTCA GCGCCGAAGT GGCGGCCGAG
TACAAGCCGG GCGGCACGCT GCCGGTCGGC CTGTTCGCCG CCGGCCAGAA GGTCGACGTG
CAGGGTACGT CGATCGGCAA GGGCTTCACC GGCACCATCA AGCGGCACAA CTTCGGCTCG
CAGCGCGCGT CGCACGGCAA CAGCCGTTCG CACAACGTGC CGGGCTCGAT CTCGATGGCC
CAGGATCCGG GTCGCGTGTT CCCGGGCAAG AAGATGTCCG GCCACCGCGG CGACGTGACC
AAGACCACCC AGAACCTTGA CATCGTGCGT GTCGACGAGG CCCGCCAGCT GCTGCTGGTG
CGCGGCGCGG TTCCTGGTGC GAAGAACGGT TTCGTGACCG TGCGCCCGGC CGTCAAGGTC
AAGGCCAAGA AGGGAGCGAA CTGA
 
Protein sequence
MRSVASVKSV RPIDVGHWRR TMTTANPGDR LGLLGRKVGM MRIFTDDGDA VPVTVLDVSN 
NRVTQVKTVE TDGYSAIQVT FGARKASRVT KPEAGHLAKA GVEAGEILRE FAVSAEVAAE
YKPGGTLPVG LFAAGQKVDV QGTSIGKGFT GTIKRHNFGS QRASHGNSRS HNVPGSISMA
QDPGRVFPGK KMSGHRGDVT KTTQNLDIVR VDEARQLLLV RGAVPGAKNG FVTVRPAVKV
KAKKGAN