| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3438 |
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| Symbol | rplV |
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| ID | 4786312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3645989 |
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| End bp | 3646318 |
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| Gene Length | 330 bp |
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| Protein Length | 109 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640092016 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001022626 |
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| Protein GI | 124268622 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00633436 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.213311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACCC GAGCAATCGT TCGCGGCGTG CGTCTGTCGG TCGACAAGGG TCGGCCGGTG
GCTGACCTGG TCCGCGGCAA GAAGGTGGAC CAGGCGCTCA ACATCCTGGA ATTCACGCAG
AAGAAGGCCG CCGTCATCAT CAAGAAGGCG CTGGAATCGG CGATCGCCAA TGCCGAGCAC
AACGACGGTG CCGACATCGA CGAGCTGAAG GTCAAGACGA TCCACGTCGA GCAGGGTGCG
ACCCTGAAGC GGTTCTCCGC GCGCGCCAAG GGCCGCGGCA ACCGCATCAG CAAGCCGACC
TGCCACATCT TCGTCACCGT CGGCAACTAA
|
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| Protein sequence | METRAIVRGV RLSVDKGRPV ADLVRGKKVD QALNILEFTQ KKAAVIIKKA LESAIANAEH
NDGADIDELK VKTIHVEQGA TLKRFSARAK GRGNRISKPT CHIFVTVGN
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