| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3423 |
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| Symbol | secY |
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| ID | 4786355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3637756 |
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| End bp | 3639066 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640092001 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001022611 |
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| Protein GI | 124268607 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.23916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAACCA ACGCGAATCA ACTGGCCAAG AGCGGCAAGT TCGGCGACCT GCGTCGCCGG
CTTGTCTTCT TGCTGCTTGC GCTCGTCGTC TATCGCATCG GCGCTCACAT TCCGGTGCCG
GGAATCGACC CGAACCAGTT GCAGCAGCTC TTCAAGGACC AGCAAGGCGG CATCCTGAGC
CTGTTCAACA TGTTCTCGGG CGGGGCACTG TCGCGCTTCA CGGTGTTCGC GCTGGGGATC
ATGCCGTACA TCTCGGCGTC GATCATCATG CAGCTGATGA CCTACGTGGT GCCGACCCTG
GAGGCGCTGA AGAAAGAAGG CGAGGCCGGC CGTCGCAAGA TCACGCAGTA CACGCGCTAC
GGCACGCTGG GTCTGGCGAT CTTCCAGTCG CTCGGTATCG CAATCGCTCT CGAAAGCTCT
GCGGGGCTGG TCATCTCGCC GGGCATGGGT TTCCGCCTGA CGGCGGTGGT GAGCCTGGTC
GCCGGCACGA TGTTCCTGAT GTGGCTCGGC GAGCAGATCA CCGAGCGCGG TCTGGGCAAC
GGCATCTCGA TCATCATCTT CGCGGGTATC GCGGCCGGCC TGCCGAGCGC GATCGGCGGA
CTGTTCGAAC TGGTCCGCAC CGGCGCGATG AGTATCGTCG CGGCGCTGTT CATCATCTCG
ATCGTGATCG CGGTGACCTA CCTTGTCGTG TTCGTCGAGC GAGGCCAGCG CAAGATCCTG
GTGAACTACG CGAAGCGTCA GGTGGGTAAC CGTGTCTACG GCGGGCAGTC GTCGCACCTG
CCGTTGAAGA TCAACATGTC GGGCGTGATC CCGCCGATCT TCGCGTCGTC GATCATCCTG
CTGCCGGCCA CTGTGGTGGG CTGGTTCGCC ACGGGCGACG GCCTGCGCTG GCTGAAGGAT
CTGGCGGCGC TGCTGTCGCC GGGGCAGCCG ATCTACGTGA TGCTCTACGC CGCGGCGATC
GTGTTCTTCT GCTTCTTCTA CACGGCGCTC GTCTTCAACA GCCGCGAGAC GGCTGACAAC
CTGAAGAAGA GTGGTGCGTT CATCCCGGGT ATCCGGCCGG GGGAGCAGAC CGCGAAGCAC
ATCGATCGCA TCCTCGGTCG CCTGACGCTC GGCGGCGCGG TGTACATCAC TGCCGTGTGT
CTGCTGCCTG AGTTCCTCGT GCTCAAGTAC AACGTGCCGT TCTACTTCGG CGGTACGTCC
CTGCTGATCA TTGTCGTCGT GACGATGGAC TTCTGGGCCC AGGTGCAGTC TTATGTGATG
TCCCAGCAGT ACGAATCGCT GCTGAAGAAG GCCAATTTCA AGGCCAGCTG A
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| Protein sequence | MATNANQLAK SGKFGDLRRR LVFLLLALVV YRIGAHIPVP GIDPNQLQQL FKDQQGGILS
LFNMFSGGAL SRFTVFALGI MPYISASIIM QLMTYVVPTL EALKKEGEAG RRKITQYTRY
GTLGLAIFQS LGIAIALESS AGLVISPGMG FRLTAVVSLV AGTMFLMWLG EQITERGLGN
GISIIIFAGI AAGLPSAIGG LFELVRTGAM SIVAALFIIS IVIAVTYLVV FVERGQRKIL
VNYAKRQVGN RVYGGQSSHL PLKINMSGVI PPIFASSIIL LPATVVGWFA TGDGLRWLKD
LAALLSPGQP IYVMLYAAAI VFFCFFYTAL VFNSRETADN LKKSGAFIPG IRPGEQTAKH
IDRILGRLTL GGAVYITAVC LLPEFLVLKY NVPFYFGGTS LLIIVVVTMD FWAQVQSYVM
SQQYESLLKK ANFKAS
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