Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3417 |
Symbol | |
ID | 4786349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3634488 |
End bp | 3635489 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640091995 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_001022605 |
Protein GI | 124268601 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.139577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAACCA ATCTGCTGAA GCCCAAAGCC ATCAACGTCG AGCCGCTGAG CGCCGCCAAG GGCGCCCACC GCGCCAAGGT CACGCTCGAG CCCTTCGAGC GCGGCTATGG TCACACGCTG GGCAATGCCC TGCGCCGCGT GCTGCTGTCG TCGATGGTGG GCTACGCGCC GACCGAAGTC ACGATCGCGG GCGTGCTGCA CGAGTACTCG GCGATCGACG GTGTTCAGGA AGACGTGGTC CACGTCATGC TGAACCTCAA GGGTGTGGTG TTCCGCCTGC ACAACCGCGA TGAAGTCACG CTGGTGCTGC GCAAGGAGGG TGAGGGTCCC GTCAAGGCCG GCGACATCCA GACCCCGCAC GACGTGGAGA TCATCAATCC CGACCACGTG ATCACGCACC TGTCGCAGGG CGGCAAGCTC GACATGCAGA TCAAGGTCGA GAAGGGCCGC GGCTATGTGC CGGGCACGAT GCGCCGCTTC GGTGACGAGC CGACCAAGTC GATCGGTCGT ATCGTCCTCG ATGCGTCGTT CTCCCCGGTT CGCCGCGTGA GCTACACGGT CGAAAGCGCG CGTGTCGAGC AGCGCACGGA CCTGGACAAG CTGGTCATGG AGATCGAGAC CAACGGTGCG ATCACGCCGG AAGAGGCGAT CCGCGCCTCG GCCAAGATCC TGGTCGAACA GCTGGCCGTG TTCGCGCAGC TCGAGGGCCA GATCAACGAC ATCTTCGACG CCCAGCCCGC ACAGCGCAGC ACGCAGTTCG ATCCGATCCT GCTGCGTCCG GTCGACGAGC TCGAGCTCAC CGTGCGCTCG GCCAACTGCC TGAAGGCCGA GAACATCTAT TACATCGGCG ACCTCATCCA GCGCACCGAG ACCGAGCTGC TGAAGACGCC GAATCTCGGC CGCAAGTCAC TCAACGAGAT CAAGGAAGTG CTGGCCTCGC GGGGGCTGAC CCTGGGCGGG CGCCTTGAGA ACTGGCCGCC GCAAGGCCTG GACAAGCGCT AA
|
Protein sequence | MQTNLLKPKA INVEPLSAAK GAHRAKVTLE PFERGYGHTL GNALRRVLLS SMVGYAPTEV TIAGVLHEYS AIDGVQEDVV HVMLNLKGVV FRLHNRDEVT LVLRKEGEGP VKAGDIQTPH DVEIINPDHV ITHLSQGGKL DMQIKVEKGR GYVPGTMRRF GDEPTKSIGR IVLDASFSPV RRVSYTVESA RVEQRTDLDK LVMEIETNGA ITPEEAIRAS AKILVEQLAV FAQLEGQIND IFDAQPAQRS TQFDPILLRP VDELELTVRS ANCLKAENIY YIGDLIQRTE TELLKTPNLG RKSLNEIKEV LASRGLTLGG RLENWPPQGL DKR
|
| |