| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3406 |
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| Symbol | pilW |
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| ID | 4786336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3621089 |
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| End bp | 3622285 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640091982 |
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| Product | fimbrial biogenesis protein |
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| Protein accession | YP_001022594 |
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| Protein GI | 124268590 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0526818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCC GTTGCACCCT CTCGAAACGC GGCGCGTCAG TTCGCGGCTT CTCGCTGGTC
GAACTGCTGG TTGCGGTCGC CATCGGCCTC GTCGTCACGC TCGCGGTGTT CGGCGTGCTG
GCAGCCAGCG AGGGCCGCAA GCGCACCTCG GTCTCAATCA ATGATGCCAA CCAGTCCGGC
GCCTATGCCG CCTACACGAT CGACCGCATG ATCCGCAGCG CAGGCTCCGG CTTCTCCGAG
GGCTGGGGCC GTGTCGGCGG ATGCCGACTG AACGCAACGT TGGGCGCGGC AGGAACGTGG
CCACGAGCGG CCGCCCTCCC TGCGCCCTTC ACCGCCATCC CGCTCACGCT TCGGCTGGCG
CCGGTGGTGA TTTTTCAGGG GGCCTCGACC GCTGGCTCCG ATGTCTTGAT GGTGATGAAC
GGGGCCGCCG GCTTCGCGGA ATCCCCCGCG GCGGTGCGCC CGGGTTCGGT GAGCGCGCTC
GAGTTCCGTG CACCCAATAC GATCGGATTC TTCGCGAACG ACCTGGTGAT GCTGGCCGGT
GGTGGCGAGT GCCAGTTGAC GCAGGTGGAT GATGACAAGC CGGCATGCGT CGCCGATCCG
ACCGCCGTGT TCCCACCGTT GAACTGTGGT CAGCAAGTGC CTCTGGGCGG CAGTTTCCAC
AACGCCTCGT CGACGACGTT TGCCACCTTG TCCACGGCGG ACGCCTATGC AATCCCGCTG
GGCAATACGA CCACCAATCG ACCGCAGTTC CAGTTGCTTG GCGTCGGCGA CAACACCACG
CTGTTCAGCT ACGACATGCT GCTGCTCAAC GGCAACGACG CGCCGCTGCC GCTGGCCGAA
GGCGTGATGA CGCTACGCGC GGTCTATGGG GTCGACACCG ATGACGATGG TGTGATCAAC
GACTGGTTCG CTCCCACCGC CGGAAGCATC TGGGATAGCG CGGCGCTGAT GAACGGCTCG
CCCGCCTCGG CGACCAACCT GCGGCGGATC GTTGCGGTGC GCATCGGCCT CGTGATGCGC
TCTTCGCTCA TCGAGCGGGA GGACGTGGCA CCGGCCACGC TGGGCCTGTT CACCGACCTT
ACCAGCGGTG GCGCCCCGCT GACGCAGAAC GTCGCGATCG CGACCGCCGA TCGACGCATG
CGCCACCGCG CCATCGAGGT GACCGTTCCT GTCCGCAACC TGCTGCTCCG GCCTTGA
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| Protein sequence | MTSRCTLSKR GASVRGFSLV ELLVAVAIGL VVTLAVFGVL AASEGRKRTS VSINDANQSG
AYAAYTIDRM IRSAGSGFSE GWGRVGGCRL NATLGAAGTW PRAAALPAPF TAIPLTLRLA
PVVIFQGAST AGSDVLMVMN GAAGFAESPA AVRPGSVSAL EFRAPNTIGF FANDLVMLAG
GGECQLTQVD DDKPACVADP TAVFPPLNCG QQVPLGGSFH NASSTTFATL STADAYAIPL
GNTTTNRPQF QLLGVGDNTT LFSYDMLLLN GNDAPLPLAE GVMTLRAVYG VDTDDDGVIN
DWFAPTAGSI WDSAALMNGS PASATNLRRI VAVRIGLVMR SSLIEREDVA PATLGLFTDL
TSGGAPLTQN VAIATADRRM RHRAIEVTVP VRNLLLRP
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