| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3393 |
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| Symbol | |
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| ID | 4786380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3607851 |
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| End bp | 3609671 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640091969 |
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| Product | putative methanol dehydrogenase protein, large subunit |
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| Protein accession | YP_001022581 |
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| Protein GI | 124268577 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.078697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0119159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTT CTAAGCATTC GGGTTGGCGC CTGATGCGCC CCCTCGGATT GGCGCTGCTC
GCGATCCCGG CAGTCGTGCA AGCGAATGCG GACGTCGAGA AGAACATTGC CAATTCCAAG
AACTGGGCGA TGCAGGCTGG TGACATGTTC AACCAGCGCT ACAGCAAGCT CGACCAGATC
AACAAGGGCA ACGTCGGCAA GATGCAGGTC GCGTGGACCT TCTCCACCGG CGTGCTGCGC
GGCCACGAGG GCTCGCCGCT GGTCATCGAC GGCACGATGT ACCTGCACTC GCCGTTCCCC
AACAAGGTCT TCGCGATCGA CCTGAACACC CAGAAGATCC TCTGGAAGTA CGAGCCGAAG
CAGGATCCGG CGGTCATCCC GCAGATGTGC TGCGACACGG TGAACCGTGG CCTGGCGTAC
GCCGAAGGCA AGGTCATCCT GCAGCAGGCC GACTCCAACC TCGTGGCCCT GGACGCCAAG
TCGGGCAAGG TGGTGTGGAG CGTGAAGAAC GGCGATCCGA AGCTCGGCGC CGTGAACACC
AACGCCCCGC ACGTCTTCAA GGACAAGGTC ATCACCGGCA TCTCCGGTGG TGAGTGGGGT
GTGCGCGGCT TCATCGCTGC CTACAACCTG AAGGACGGCA AGCCGGCGTG GAAGGGCTAC
AGCGTGGGCC CCGACGCCGA GATGCTGATC GACCCGGCCA AGACCACCAC CTGGATCGAC
GGCAAGGTCG CTCCGGTGGG CGCCGACTCG TCGCTGAAGA CCTGGAAGGG CGATCAGTGG
AAGATCGGTG GCGGCACCAC CTGGGGCTGG TACAGCTACG ACAAGGCGCT GAACGCCATG
TACTACGGCA CCGGCAACCC GTCGACCTGG AACCCGAGCC AGCGCCCGGG CGACAACAAG
TGGTCGATGT CAATCTGGTC GCGTGACGTC GACACGGGCA AGGTCAACTG GGTCTACCAG
ATGACGCCGT TCGACGAGTG GGACTTCGAC GGCATCAACG AGATGATCCT CGCGGACATC
AACGTGAAGG GCAAGCCGAC CAAGGCGCTG GTGCACTTCG ACCGCAACGG CTTCGCGTAC
ACGATGGACC GCACCAACGG TGCGCTGCTC GTGGCCGAGA AGTACGACCC GAAGGTGAAC
TGGGCGACCC ACGTCGACAT GAAGACCGGC CGTCCCCAGG TCGTGAAGCA GTACTCGACG
GCGCAAAACG GCCCCGATGT CAACACCAAG GGCATCTGCC CGGCGGCGCT GGGCTCGAAG
GACCAGCAGC CGGCCTCGTT CGACCCGAAC ACCAAGCTCT TCTACGTGCC GACCAACCAC
GTCTGCATGG ACTACGAGCC GTTCAAGGTC GAGTACACCG CGGGCCAGCC GTACGTGGGC
GCGACGCTGT CGATGTTCCC GGCTCCGGGC AGCCATGGTG GCATGGGCAA CTACATCACC
TGGGATGCCG GTACCGGCAA GATCGTGCAG AGCAAGGCCG AGAAGTTCTC GGTGTGGAGC
GGTTCGCTCA ACACCGCGGG CGGCCTGAGC TGCTACGGCA CGCTGGAGGG CTACTTCAAG
TGCGTCGATG CCAAGGACAT CAGCAAGGAA CTGTTCAAGT TCAAGACTCC GTCCGGCATC
ATCGGCAACG TGTTCACCTA TGAGCACAAG GGCAAGCAGT ACATGGGCGT GTTCTCGGGC
ATCGGCGGCT GGGCCGGCAT CGGCATGGCA GCGGGCCTCG AGAAGGACCA GGACGGCCTG
GGTGCTGTGG GCGGCTACAA GGAGCTGAAC CAGTACACGG AACTCGGCGG CTCGCTGACG
GTCTTTGCAC TGCCGAACTG A
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| Protein sequence | MKVSKHSGWR LMRPLGLALL AIPAVVQANA DVEKNIANSK NWAMQAGDMF NQRYSKLDQI
NKGNVGKMQV AWTFSTGVLR GHEGSPLVID GTMYLHSPFP NKVFAIDLNT QKILWKYEPK
QDPAVIPQMC CDTVNRGLAY AEGKVILQQA DSNLVALDAK SGKVVWSVKN GDPKLGAVNT
NAPHVFKDKV ITGISGGEWG VRGFIAAYNL KDGKPAWKGY SVGPDAEMLI DPAKTTTWID
GKVAPVGADS SLKTWKGDQW KIGGGTTWGW YSYDKALNAM YYGTGNPSTW NPSQRPGDNK
WSMSIWSRDV DTGKVNWVYQ MTPFDEWDFD GINEMILADI NVKGKPTKAL VHFDRNGFAY
TMDRTNGALL VAEKYDPKVN WATHVDMKTG RPQVVKQYST AQNGPDVNTK GICPAALGSK
DQQPASFDPN TKLFYVPTNH VCMDYEPFKV EYTAGQPYVG ATLSMFPAPG SHGGMGNYIT
WDAGTGKIVQ SKAEKFSVWS GSLNTAGGLS CYGTLEGYFK CVDAKDISKE LFKFKTPSGI
IGNVFTYEHK GKQYMGVFSG IGGWAGIGMA AGLEKDQDGL GAVGGYKELN QYTELGGSLT
VFALPN
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