| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3375 |
|---|
| Symbol | |
|---|
| ID | 4786362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3586334 |
|---|
| End bp | 3587329 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640091951 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001022563 |
|---|
| Protein GI | 124268559 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.734729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAC GCACCGACCT GGAACTCGTT CACCTGGTCA AGCGCTACGG CGACGCGGTC
GCCGTCGCCG GGATCGACCT CAAGATCGCC GCCGGCAGCT ACTGCTGTCT GCTCGGGCCC
TCGGGCTGCG GCAAGACCTC CACGCTGCGC ATGATCGCCG GGCACGAGCT GGCGAGCGAG
GGCGACATCG TGCTCGGCGG CCGCAACATC ACCAACCTGC CGGCGTCCGA GCGCGGCACC
GCGATGATGT TCCAGAGCTA CGCGCTGTTC CCGCACCTGA GCGCGCTCGA CAACGTGGCC
TTCAGCCTGA AGATGCGCGG CGTCGACAAG GCCGCGCGGC AGAAGAAGGC GGCTGACCTG
CTGGAGCGCG TGTCGCTCGG CCACCTGGCG CACCGCAAGC CGGCCGAGCT GTCGGGCGGC
CAGCAGCAGC GCGTGGCGCT GGCGCGCGCG CTGATCACCG AACCCAAGGT GCTGCTGCTC
GACGAGCCGC TGTCGGCGCT CGATCCCTTC CTGCGCATCA AGATGCGCGC CGAGCTCAAG
GGCTGGCAGA CCTCGCTGGG CATGACCTTC ATCCACGTCA CGCACTCGCA GGAGGAGGCG
ATGGCGCTGG CCGACCAGGT GGTGGTGATG AGCCAGGGCC GCATCGAGCA GGACGGCTCG
CCGCACAGCG TGTTCAACGC GCCGCGCAGC GAGTTCGTGG CGCGCTTCAT GGGCGGGCAC
AACGTCATTC CCTCGTCGCG CGGCCTGGTG GCGGTGCGCG CCGACAAGAC GCGCCTGAGC
CGCGACCCGC TGCCGGCCGG CGACACCGTG CTGCCGGCCA CCGTGCGCGC CACCGAGTAC
CAGGGCACCT ACGTACTGCT GACGCTGCAC AGCGCGGCGG TCGACGAGTT CAACGTCGTG
CTGCCCGAGG CTGCCTTCGA GGCCCAGCCC TGGCAGCCCG GTGACAGCGC CTGCGCCCAC
TGGGACGCCG CCGACATGCA TCCGCTGGCC GCCTGA
|
|---|
| Protein sequence | MNPRTDLELV HLVKRYGDAV AVAGIDLKIA AGSYCCLLGP SGCGKTSTLR MIAGHELASE
GDIVLGGRNI TNLPASERGT AMMFQSYALF PHLSALDNVA FSLKMRGVDK AARQKKAADL
LERVSLGHLA HRKPAELSGG QQQRVALARA LITEPKVLLL DEPLSALDPF LRIKMRAELK
GWQTSLGMTF IHVTHSQEEA MALADQVVVM SQGRIEQDGS PHSVFNAPRS EFVARFMGGH
NVIPSSRGLV AVRADKTRLS RDPLPAGDTV LPATVRATEY QGTYVLLTLH SAAVDEFNVV
LPEAAFEAQP WQPGDSACAH WDAADMHPLA A
|
|---|
| |