| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3348 |
|---|
| Symbol | |
|---|
| ID | 4786389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3557725 |
|---|
| End bp | 3559665 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640091921 |
|---|
| Product | putative nucleotidyltransferase |
|---|
| Protein accession | YP_001022536 |
|---|
| Protein GI | 124268532 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.351645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACG AGGAGACCGC GATGAGCGAT GAGGCGCTCC CTGCTGCCGC ACCCCGGCCC
TGCGGGCCGC TGCTGGGCCA CCTGTGCCAG CTGCTGCGAC GTTACCTGCC CTTCTCGCAC
ATGGCGACGG TGGATGTCGA GCGCTTCGTC GCCGCGGCGA GCGAAGCCTA CTTCGCGCCC
GACGAGTGCG TACTGCGGCC CGAGGACGGG CCGGTCCGGC ATCTCTACTT CATCCGCGAC
GGTGCGGTGA GTGCCGTGCG GGGGGCCGAT CAGGTCGACG AGGGCGGCTT CCAGTACGAG
ACCGGCGACA TGTTTCCGGT TGCCGCCCTG ATGGCGCGAC GCGCGGTGAG CGCCGTCTAC
ACCGCCACGC GCGACACCTT CTGCCTGCTG CTGCCTCTGG AGGCCGTCGA CGAGCTCGTC
GCGGCGAGCC CGCCGTTCGC CGACCTGCTG AACCGGCGCA TGCTCAACTT CATCGACGCC
TCGCGCCAGG CCTTGCAGTC GGCCTACGCG TCGCAGGCGT TCGCGACCCA GTCGCTCGAG
CGCCGGCTCG GCGAACTGGC CACGCCGGCC CCGCGGACCT GCCGTCCCGA CACGCCGCTC
GCGCTGGCGC TGCAGGCCAT GCAGCAGCAC CGCATCGGCT CGATGCTGGT CACGGACGAC
CTGGGCGCGC CGGCCGGCAT CCTGACGCGC TACGACATCC TGGACCGCAT CACGCTGCCG
CAGTTGCCGC TGTCGACACC GATCGCCGCG GTGATGACGC AGCCGGTGCA CGCGCTGACG
GTCGACCACA CCGCGCAGGA CGCCGCGTTG CTGATGTCGC GCCACGGGCT GCGCCACGTG
CCGATCACGT CGTCGGGCCG GCTCGTCGGC GTGGTGTCGG AACGCGACCT GTTCGTGATG
CAGCGTCTTT CGGTGAGGCA GCTCAGCAGC TCGATCGGCA GCGTGGACAC TGTCGACGCG
ATGCCGGCCG TGGCGGCCGA CCTGCGCCGG CTCGCCGCCG CGCTGCTGGC GCAGGGCGTG
CAGGCTCGTC AACTGACCGA GCTGATCAGC CACCTCAACG ACCTGCTCAC GCGGCGGCTG
ATCGAGCTGA CCGCTACACG CCACGGCCTG GACCTCGCGC GCGCCTGCTG GCTCGCCTTC
GGCTCCGAGG GTCGGTCGGA GCAGACCATC GCCACCGACC AGGACAACGG CCTGATCTTC
GAAAGCCGCG AGCCCGCGGC CGACCGTCCG GCCTGGCTGG CCTTCGCGCG GGATGTCAAC
GAGGCGCTCG ATGCCTGCGG CTATCCGCTG TGCAAGGGCC AGGTCATGGC GAGCAATCCC
GAATGCTGCC TGACGCCGGC GGAGTGGCAG GAGCGCTTTG CGCGCTGGAT CGAGCACGGC
GCTCCCAGGG ACCTGCTGGC GGCCAGCATC TACTTCGACT TCCGCCCGCT GGCCGGGGCC
GTTGCGCTGG CCGGCCCGCT GCGCGACTTC GTCACGCGAC GCGCTCGCGA GGTGCCCCGC
TTCTGCCGGC AGCTGGCCGA GGACCTGCTG CGCACGCGCG CACCGCTCGA CTGGCTGGGC
GGCATCGACA GCCAGACGAT CGAGGGCGTC CGGGCGATCG ACCTGAAGCT CCACGGCACG
GCGATCTTCG TCAACGCCGC GCGCTTGCAC TGCCTGGCGC TCGGCGTGCC CGAGGTCAAC
ACGCGCCGTC GGCTCGAGGC GATCGCCCGG GCGCGCGGCG CGCCGCCGCA GCACGGCGAG
GCCTGGATCG GCGCCTTCGA GTTCCTGCAG ATGCTGCGGC TGCGCGTGCA GCTCGAAGGC
CTGGCGCCAG GCGACGCGCG GCAGCATCCG AACGCGATCC GGCTCGACGC CCTCAACGAA
CTCGACCATC GCATCCTGAA GGAGGCGTTC CGTGTCGCGC GCCGCCTGCA GCAGCGCATC
GAGCTCGATT ACCTGCGCTG A
|
|---|
| Protein sequence | MPDEETAMSD EALPAAAPRP CGPLLGHLCQ LLRRYLPFSH MATVDVERFV AAASEAYFAP
DECVLRPEDG PVRHLYFIRD GAVSAVRGAD QVDEGGFQYE TGDMFPVAAL MARRAVSAVY
TATRDTFCLL LPLEAVDELV AASPPFADLL NRRMLNFIDA SRQALQSAYA SQAFATQSLE
RRLGELATPA PRTCRPDTPL ALALQAMQQH RIGSMLVTDD LGAPAGILTR YDILDRITLP
QLPLSTPIAA VMTQPVHALT VDHTAQDAAL LMSRHGLRHV PITSSGRLVG VVSERDLFVM
QRLSVRQLSS SIGSVDTVDA MPAVAADLRR LAAALLAQGV QARQLTELIS HLNDLLTRRL
IELTATRHGL DLARACWLAF GSEGRSEQTI ATDQDNGLIF ESREPAADRP AWLAFARDVN
EALDACGYPL CKGQVMASNP ECCLTPAEWQ ERFARWIEHG APRDLLAASI YFDFRPLAGA
VALAGPLRDF VTRRAREVPR FCRQLAEDLL RTRAPLDWLG GIDSQTIEGV RAIDLKLHGT
AIFVNAARLH CLALGVPEVN TRRRLEAIAR ARGAPPQHGE AWIGAFEFLQ MLRLRVQLEG
LAPGDARQHP NAIRLDALNE LDHRILKEAF RVARRLQQRI ELDYLR
|
|---|
| |