| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3346 |
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| Symbol | |
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| ID | 4786387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3551139 |
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| End bp | 3556928 |
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| Gene Length | 5790 bp |
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| Protein Length | 1929 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640091919 |
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| Product | UvrA family protein |
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| Protein accession | YP_001022534 |
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| Protein GI | 124268530 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.973275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGGCC CGATCCCTAG AATCTTCCGC TCACCCCCCG GAACCCCCAT GCCCAACGGT
CAGCGCCCTC CCGGCGTGAT CCGCATTCGC GGTGCACGCC AGCACAACCT GAAGAACCTC
GACCTGGACC TCCACACGGG AGAACTGACG GTCGTCACCG GGCCCAGCGG CTCGGGCAAG
TCCAGCCTGG TGTTCGACAC GCTGTACGCC GAGGGCCAGC GCCGCTACGT CGAGACCTTC
AGCGCCTATG CGCGCCAGTT CCTCGACCGC ATGGACCGCC CGGCGGTCGA CCATGTCGAG
GGCGTGCCAC CGGCCATCGC GATCGACCAG ACCAACCCGG TGCGCACCTC GCGCTCCACG
GTCGGCACCA TGACCGAGCT GAACGACCAC CTGAAGCTGC TGTTCGCGCG CGCCGCGCAG
CTGTTCGACC GGCAGACCGC GAAGCCGGTG CGCGAGGACG ATCCGGAGTC GATCTACCGC
GAACTGCAGC AGCGCGCCGC GCCCGGCCAG CGCCTCGTGG TGACTTTCCC GGTCGAGCTG
CCGGCCAGCG CGACCGCGGC CGACGTCGAG CAATGGCTCG CCGCCAGCGG CTACACGCGC
GTGCAGGCCG AGCGCGAGAT CGCCACGCCC ACCGGGCCGC GCAAGCTGCT CGACGTGGTG
GCCGACCGCT TGCGGCTCGA CGGCACCGAG AAATCGCGCG TCGTCGAGGC GCTCGAGGTG
TCGCTCAAGC GCGGCGGCGG GCGCGTCAAC GTCTATGCCG TGGCGGGAGA GGGCGAAGAA
CAGCTCTGGC GCTTCTCCTC CGGCCTGCAC AGCCCCGACA GCGAGCTGCG CTACAGCCAT
CCGCAGCCGT CGATGTTCTC GTTCAACTCG GCCTTCGGCG CTTGCGAGAC CTGCCGCGGC
TTCGGCCGCG TGATCGGCGT CGACTGGGGG CTGGTGATGC CGGACCACCG CAAGACGCTG
CGCACCGGTG TCGTCAAGAC CATCCAGACG CCGGCCTGGA AGGAGATCCA GGCCGACCTG
CTGAAGTACG CCGGCGAGGC CGGCATCCCG CGCGACACCG CCTGGAGCCA GCTCAGCGAC
GCGCAGCGCG ACTGGGTGCT CGACGGCACG CCCAACTGGA AGGGGAACTG GAACAAGCAG
TGGTACGGCA TCAAGCGCTT CTTCGAGTAC CTGGAGAGCA AGGCCTACAA GATGCACATC
CGTGTGCTCC TGTCCAAGTA CCGCAGCTAC ACGCCGTGCC CGGCCTGCGG CGGCGCGCGC
CTGAAGCTGG AGTCGCTGCA GTGGCGCATC GGCACGAAGG AGGGGGCCGA TGCGGCCCTG
AAGGCGGCCC AGCGCTTCCT GCCGGTCGGC GCGGCCTGGT CGCGCGAACA GCTGGAAGCG
CTGCCGGGCC TGAGCCTGCA CGACCTGATG CTGCTGCCGA TCGATCGGCT GCGGCGCTTT
TTCGACGAGC TCACCTTGCC GAGCACGATG CTCGACGACG CACTGGAGCT GCTGCTCGAC
GAGGTGCGAA CCCGGCTCAA GTACCTGTGC GACGTGGGCA TCGGCTACCT CACGCTCGAC
CGCCAGAGCC GCACGCTGAG CGGCGGCGAG GTGCAGCGCA TCAACCTCAC CACCGCGCTC
GGCACGTCGC TGGTCAACAC GCTGTTCGTG CTGGACGAGC CGTCGATCGG CCTGCACCCG
CGCGACATGA ACCGCATCGT GCAGGCCATG CACCGCCTGC GCGATGCCGG CAACACGCTG
GTGGTCGTGG AGCACGACCC GGCCGTGATG CTGGCCGCCG ACCGCGTGCT CGACATGGGC
CCGGGCCCCG GCACCCAGGG CGGGCGCGTC GTGTTCGACG GCACGCCCGA CGACCTCAAG
CGCGCCGACA CGATGACCGG CGCCTACCTC GGCGCGCGCC GCAGCATCGG CCTGGGTCTC
AAGCGGCTGG TGACCGACGG CACGCCGAGG CTCATCGTGG AGGGCGCGCG CGAGCACAAC
CTGCGCGGCA TCACGGTCGA GTTCCCGCTG CAACGCCTGG TGGTGGTGAC CGGCGTGTCC
GGCTCAGGCA AGAGCACGCT GATCCAGGAC CTGCTGTTCC CCGCGCTGGC GCGCCACTTC
GGCAAGGCCA CCGAGACGCC GGGCGCGCAC GACCGCCTGC TCGGCGCCGA CTGGCTGAGC
GACGCGGTGT TCGTCGACCA GAGCCCGATC GGCAAGACCG CGCGCTCCAA CCCGGCTAGC
TACGTCGGGG CCTTCGACAC GCTGCGCAAC ATCTTCGCCG AGGCACCGAT GGCGCTGCAG
CGCGGCTACG GCGCGGGCAT GTTCAGCTTC AATGCCGGCG ACGGCCGCTG CCCGACCTGC
GGCGGTTCGG GCTTCGAGCA CGTGGAGATG CAGTTCCTCA GCGACGTCTA CCTGCGCTGC
CCCGACTGCG ACGGCAAGCG CTTCCGCGCC GAACTGCTGG AGGTGAAGGT CCAGCGCGGC
GGCAAGTCCT TCGACGTGAG CGAGGTGCTG GAGCTGACCA TCGCCGACGC GGTGCGCTAC
TTCGCCGACG ATCGCGAGGT GTTGCGCGCG CTGCAGCCTC TGGCCGACGT GGGCCTGGAC
TACGTGAAGC TCGGCCAGCC GGTGCCCACG CTGAGCGGCG GCGAGGCGCA GCGCCTGAAG
CTCGCCGGCT TCCTGGCCGA GGCCGCAAAG AACGGCAGCA GCTCGCGCCA GGCGGTGGCG
AAGAAGGGCA CGCTGTTCCT GTTCGACGAG CCAACCACCG GCCTGCACTT CGACGACATC
GCCAAGCTGA TGCGTGCCTT CCGCAAGCTG CTGGAGGCCG GCCATTCGCT GCTGGTGATC
GAACACAACC TCGACGTGAT CCGCGCGGCC GACTGGCTGG TCGACCTGGG TCCCGAGGGC
GGCGAGGCCG GCGGCGAGCT GGTCTGCTCC GGCACCCCCG ACGACGTGAA GCGGCACCCC
ACGTCGCACA CCGGCGCGGC GCTGCGCGAG TACGAGCAGA GCCTCGGGCA GGGCGGCCTC
GCGGTCGAGG AGGGGCTGCC GCTGCAGTCG CTGCTGACCG AGGCGCGGCG CGCCCGGCGC
GAGCGCGAGG CCGGCGCTGC CGCCCACGCG ATCCAGATCG TCAATGCCCG CGAGCACAAC
CTCCAGGGCC TGTCGGTCGA CATCCCGCGC GGGAAGTTCA GCGTGGTCAC CGGTGTCTCC
GGTTCGGGCA AGAGCACGCT GGCCTTCGAC ATCCTGTTCA ACGAGGGCCA GCGCCGCTAT
CTCGAGAGCC TCAACGCCTA CGCGCGCAGC ATCGTGCAGC CGGCCGGCCG GCCCGAGGTC
GACGCGGTGT ACGGCATCCC GCCCACCGTC GCGATCGAGC AGCGCCTGAG CCGCGGTGGC
CGCAAGAGCA CCGTCGCCAC CACCACCGAG GTCTATCACT TCCTGCGCCT GCTCTACGTC
AAGCTCGGCA CGCAGTACTG TCCCAAATGC ACGGCCGACG CCAGCGTGGC GGTGCGACCG
CAGACGCCGG AGTCGATCGC CGCGCAGCTG CTGCGCGACT ACAAGGGCCA GCACATCGGC
CTGCTCGCGC CGCTGGTGGT GAACCGCAAG GGCGTCTACA CCGACCTCGC GAAGTGGGCC
GCGCAGCGCG GCCACACGCA CCTGCGGGTC GACGGCGAAT TCCTGAAGAC CTCGCCGTGG
CCACGCATCG ACCGTTTCAA GGAGCACACG CTGGAGCTGC CGGTCGGCGA CATCGTCGTC
ACGCCCGACA ACGAGGCCGA ACTGCGCGCG CTGCTCGCGA AGACGCTGGA GCTCGGCAAG
GGCGTGGTGC ACCTGCTGGG CCCGCTCGAC GGCCTGAAGG CGGCGATGGC CGCCGGCGCG
CCGACGCACC GCATCGGCCG CGTCAAGGTG TTCTCGACCA AGCGCGCCTG CCCCGCCTGC
GGCACCAGCT ACCCCGAGCT GGACCCGCGC ATGTTCTCGT ACAACAGCAA GCACGGTTGG
TGCCCCGATT GCGTGGGCAC CGGCCTCACG CTGACGCGCG AGCAGCGCAA GGCCCTCGAC
GATTCGGTGC GCGACGACGA CACCGGCGGG CGCGAGATGA CCTTCGCCGA ACCCGAGATC
GAGGACGTGG CCGACGCGCC CTGCGGCACC TGCCATGGCG CGCGCTTGAA CCCGGTCTCG
CTGGCCGTGC GTTTCGGCCG CGGGGCGGAG GGCGAGCAGT CGATCGCCGC GGTGGCGGCG
CGCGCGGTGA ACGACGCGCG CCGCTGGATC GAGACCCAGA AGCTCGATGG CCGCGAGGCC
ACGATCGCAC GCGACGTGAT CGCCGAGATC CGCTCGCGGC TGGGCTTCCT CGACCAGGTG
GGCCTGGGCT ATCTGACGCT CGATCGCGCC GCGCCCACGC TGAGCGGCGG CGAGGCGCAG
CGCATCCGCC TCGCGGCGCA GCTGGGCAGC AATCTGCAGG GCGTGTGCTA CGTGCTCGAT
GAGCCGACCA TCGGTCTGCA CCCGCGCGAC AACCGCGTGC TGCTCGATGC GCTGCACACG
CTGGGTTCGC AGGGCAACAC GCTGGTGGTG GTGGAGCACG ACGAAGACAC CATCCGCCGC
GCCGACCACA TCATCGACAT CGGCCCCGGC GCCGGCAAGC GCGGCGGCCG TCTGGTGGCG
CAGGGCACCG CCGCCGACCT GCTGCGCGCC CCCGACTCGC TGACCGGCCG CCTGCTCGAG
CACCCGATGC GCCACCCGCT GCAGGCGCGG CGCGCGGTGC CGCCGGGCGT GCCCTGGCTC
ACGCTGCGCG GCGCCACGCT GCACAACTTG GCCGGGCTCG ACGTCGGCGT GCCGGTCGGG
CGGTTGGTTG CGGTGACGGG CGTTTCCGGC TCGGGCAAGA GCACCGTCGC GCGCGACGTG
CTGCTGGTCA ACGTGCACGC GGCGGTGGCG ATGAAGGCCA CGAAGGCCGG TCGCGATGCG
TTGGCCGCCG GCAAGCGGCC GGCCTGGGTG GGTTGCAGCC AGCTCGAAGG CTTCGAGCCC
ATCGATCGCG TGCTCGAGGT CGACCAGACG CCGATCGGCA AGACGCCGCG TTCCTGCCCG
GCCACCTACA TCGGCTTCTG GGACACGATC CGCAAGCTGT TCGCCGAGAC GCTGGAGGCC
AAGGCGCGCG GCTATGCCGC CGGCCGCTTC TCGTTCAACA CCGGCGAGGG CCGCTGTCCG
GGCTGCGAGG GCCAGGGCCT GCGCACCATC GAGATGGCCT TCCTGCCGGA CGTGAAGGTG
CCCTGCGACC TGTGCCACGG CGCGCGCTTC AACCCCGAGA CGCTGGCCGT CACCTGGCGC
GGCAAGAGCA TCGGCGACGT GCTGCAGATG GAGGTGGACG AGGCGGTCGA CTTCTTCGCC
TCCATGCCCG CCATCGCCCA CCCGCTGCAA TTGCTGAAGG ACGTGGGCCT GGGCTACCTG
ACACTGGGTC AGCCCTCGCC CACGCTGAGC GGCGGCGAGG CGCAGCGCAT CAAGCTCGTC
ACCGAGCTCA GCAAGGTGCG TGACGACGTG ACGCGGCGCG GCCAGAAGCC GCCCCACACG
CTCTACGTGC TGGACGAACC GACGGTGGGC CTGCACATGG CCGACGTCGA GAAGCTGATC
CGCGTGCTGC ATCGGCTGGT CGACGGCGGC CACAGCGTGG TGGTGATCGA GCACGATCTC
GACGTCATCG CCGAAGCCGA CTGGGTGCTC GACCTCGGTC CCGAGGGCGG TGCCGGCGGT
GGCCGTGTGG TGGCGGCGGG CACGCCCGAG CAGGTGGTGG CCGCGGGCAC GCACACCGGC
GTGGCGCTGG CGCCGGTGCT GAAGCGGTGA
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| Protein sequence | MTGPIPRIFR SPPGTPMPNG QRPPGVIRIR GARQHNLKNL DLDLHTGELT VVTGPSGSGK
SSLVFDTLYA EGQRRYVETF SAYARQFLDR MDRPAVDHVE GVPPAIAIDQ TNPVRTSRST
VGTMTELNDH LKLLFARAAQ LFDRQTAKPV REDDPESIYR ELQQRAAPGQ RLVVTFPVEL
PASATAADVE QWLAASGYTR VQAEREIATP TGPRKLLDVV ADRLRLDGTE KSRVVEALEV
SLKRGGGRVN VYAVAGEGEE QLWRFSSGLH SPDSELRYSH PQPSMFSFNS AFGACETCRG
FGRVIGVDWG LVMPDHRKTL RTGVVKTIQT PAWKEIQADL LKYAGEAGIP RDTAWSQLSD
AQRDWVLDGT PNWKGNWNKQ WYGIKRFFEY LESKAYKMHI RVLLSKYRSY TPCPACGGAR
LKLESLQWRI GTKEGADAAL KAAQRFLPVG AAWSREQLEA LPGLSLHDLM LLPIDRLRRF
FDELTLPSTM LDDALELLLD EVRTRLKYLC DVGIGYLTLD RQSRTLSGGE VQRINLTTAL
GTSLVNTLFV LDEPSIGLHP RDMNRIVQAM HRLRDAGNTL VVVEHDPAVM LAADRVLDMG
PGPGTQGGRV VFDGTPDDLK RADTMTGAYL GARRSIGLGL KRLVTDGTPR LIVEGAREHN
LRGITVEFPL QRLVVVTGVS GSGKSTLIQD LLFPALARHF GKATETPGAH DRLLGADWLS
DAVFVDQSPI GKTARSNPAS YVGAFDTLRN IFAEAPMALQ RGYGAGMFSF NAGDGRCPTC
GGSGFEHVEM QFLSDVYLRC PDCDGKRFRA ELLEVKVQRG GKSFDVSEVL ELTIADAVRY
FADDREVLRA LQPLADVGLD YVKLGQPVPT LSGGEAQRLK LAGFLAEAAK NGSSSRQAVA
KKGTLFLFDE PTTGLHFDDI AKLMRAFRKL LEAGHSLLVI EHNLDVIRAA DWLVDLGPEG
GEAGGELVCS GTPDDVKRHP TSHTGAALRE YEQSLGQGGL AVEEGLPLQS LLTEARRARR
EREAGAAAHA IQIVNAREHN LQGLSVDIPR GKFSVVTGVS GSGKSTLAFD ILFNEGQRRY
LESLNAYARS IVQPAGRPEV DAVYGIPPTV AIEQRLSRGG RKSTVATTTE VYHFLRLLYV
KLGTQYCPKC TADASVAVRP QTPESIAAQL LRDYKGQHIG LLAPLVVNRK GVYTDLAKWA
AQRGHTHLRV DGEFLKTSPW PRIDRFKEHT LELPVGDIVV TPDNEAELRA LLAKTLELGK
GVVHLLGPLD GLKAAMAAGA PTHRIGRVKV FSTKRACPAC GTSYPELDPR MFSYNSKHGW
CPDCVGTGLT LTREQRKALD DSVRDDDTGG REMTFAEPEI EDVADAPCGT CHGARLNPVS
LAVRFGRGAE GEQSIAAVAA RAVNDARRWI ETQKLDGREA TIARDVIAEI RSRLGFLDQV
GLGYLTLDRA APTLSGGEAQ RIRLAAQLGS NLQGVCYVLD EPTIGLHPRD NRVLLDALHT
LGSQGNTLVV VEHDEDTIRR ADHIIDIGPG AGKRGGRLVA QGTAADLLRA PDSLTGRLLE
HPMRHPLQAR RAVPPGVPWL TLRGATLHNL AGLDVGVPVG RLVAVTGVSG SGKSTVARDV
LLVNVHAAVA MKATKAGRDA LAAGKRPAWV GCSQLEGFEP IDRVLEVDQT PIGKTPRSCP
ATYIGFWDTI RKLFAETLEA KARGYAAGRF SFNTGEGRCP GCEGQGLRTI EMAFLPDVKV
PCDLCHGARF NPETLAVTWR GKSIGDVLQM EVDEAVDFFA SMPAIAHPLQ LLKDVGLGYL
TLGQPSPTLS GGEAQRIKLV TELSKVRDDV TRRGQKPPHT LYVLDEPTVG LHMADVEKLI
RVLHRLVDGG HSVVVIEHDL DVIAEADWVL DLGPEGGAGG GRVVAAGTPE QVVAAGTHTG
VALAPVLKR
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