| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3329 |
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| Symbol | |
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| ID | 4786428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3533906 |
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| End bp | 3535960 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640091902 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001022517 |
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| Protein GI | 124268513 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC GCCGCCATTT CCTAGACGCC GCCAACGCCC CGGCCGCGGA CGGCCGCGAC
ATGCGGGCGC CCGCCGAGGC GGCCGATGCG CCGGGCAACC TGCTGCCCAC GGCGTCGATC
GTCGGGCAGG CGATGGGCGA GGCCCGCCGC GCCCTGGGCC TGGTGCTGGT GGGTGCGGCG
GTCCTGCTTG CCATGCTGGT CGGCGAGCGC TGGCTGTCCA GCACCGCCGA GCAGGCCGCC
GCGCGCCGCC ACGCCGAAGC CCTGCGGGTG GCCGGGGCGA TGCGCCTGGT GGACCTGGAG
CGGACCACGG CGGCCCAGAT GGCCGTGATC ACCGGCCAGC CGCGCTGGGT GGAGCGCTTC
GACAGCCAGC GACTCGAGTT CGAGCGCCTG CAGGCCGAGG CCCGCAGCCT GGCGCCGGCG
CACGCCATCG AGCGCTTCGA CAGCGAGACG CTCAGCGCGA CGGCCGAACT GGAAGACATG
CGCGAATCGG CCTTCGAGGC GGTGACCGTG GGCGCGGCCG ACGTCGCGCG CAAGATCTTC
GAGGGCAACC GCTACCGCGA GCAATCCGCG CTGCTGCAGC AGGCGATTGC CGACTTCAGC
GAGGCCACCG TGGCCGCCGC CGGCGCCGAG ATCAACGCGC TGCGCCGCCG CAATGCATTG
TTCGGGGCCG GGCTGCTGGT GTGCGGCGGG CTGCTCGGGG CCTTTCTCTG GCGCCGCCTG
GCCGGCTCGC GCACGCGCTT CCTGCATGCC GAGCAGCGCG TGAAGCACCT GGCCGCCAGC
GACCTGCTCA CCGGCCTGCC CAACCGCGCG GCACTGCACG ACGAGATGGC CGCCGCCATG
GCGCGCGCCG AACGGGCCGG CACCCACCTC GCGGTGCTGA TGATCGACCT GGACCGCTTC
AAGCCGATCA ACGACCGCCA CGGCCACCTG GTGGGCGACC GGGTGCTGAA GGAAGTGGCA
CGGCGCCTGT GCCACATCCT GCGCGGCGGC GAGACCTGCG CGCGCTACGG CGGCGACGAG
TTCGTGGTGC TGGTCGACGA CGACGTTCAG CCCTCGGCGG CGCACCACTT GGCCGAACGC
GTGGTGCGCG CGATGAGCGA GCCGATGCAG ATCGGGCCGC TCAGCGTGAC CATCGGCGCG
ACCGTGGGCA TCGCCCGCTT TCCGGACGAT GGGCGCGACG CCGACGAACT GCTGCGCAAG
GCCGACTCGG CGCTCTACCG CGCCAAGGCC GAGAGCCGCG GCGGGCTGAG CTTCTACAAC
GTGGGCCTCG ACGAGCTGGT GGCCGAGCGC GCCGCGCTGG AACAGGCCAT GCGGGACGGC
CTCACCCGCG GCGAGTTCGT GGCGTACTTC CAGCCCATCG TCGAACTGAA CAGCCAGCGC
GTGCAGTCGG TGGAACTGCT GGCACGCTGG CAGCACCCGC AGCGCGGGCT GCTGCCGCCG
GCGCAGTTCA TCGCGCTGGC CGAAGACGCG GGTCTGATCG GCGCGCTGAT GCTGTCGGTG
CTACGCAATG CCTTCGCCGA GCTGCCGGCC CTGCCGGCGC ACTGGCGCGT GTCGGTGAAC
GTGGCGCCGC AGCAGATCCA GGACGAGACG CTGGTGCCGC AGCTGCTGGC CCTGCTGGCC
GAGCACGGCG TGCCTCCGGC CCGGCTGGAC GTGGAACTGA CCGAGACCGC GCTGGTGCGC
GACACCTCCG CGGCACGGCG CGTGATGCGC GACCTGAAGC TGGCGGGCTT CACCGTCACG
CTCGACGACT TCGGCACCGG CCACTCCAGC CTCGCCTACC TGGCGGAGCT GGACTTCGAC
AAGATCAAGA TCGACCGCTC GTTCGTGCAC ACGCTGCGCG AGCGTCCGCA AAGCGCCAAG
GTGGTGGACG CCATCATCGG CCTGTCGCGC AGCCTCGGCG TGCCGGCCGT CGCCGAAGGC
ATCGAGACCG AAGCCGACGC CACGCGCCTG CTGCGCATGG GCTGCGCCCT CGGCCAGGGC
TACCTGTTCG GGCGACCGGT CCCGGCTGGC GAGCTGCCGG GGCTGGGTGA GGGGCCGCGG
GCGACGGCGG CGTGA
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| Protein sequence | MPRRRHFLDA ANAPAADGRD MRAPAEAADA PGNLLPTASI VGQAMGEARR ALGLVLVGAA
VLLAMLVGER WLSSTAEQAA ARRHAEALRV AGAMRLVDLE RTTAAQMAVI TGQPRWVERF
DSQRLEFERL QAEARSLAPA HAIERFDSET LSATAELEDM RESAFEAVTV GAADVARKIF
EGNRYREQSA LLQQAIADFS EATVAAAGAE INALRRRNAL FGAGLLVCGG LLGAFLWRRL
AGSRTRFLHA EQRVKHLAAS DLLTGLPNRA ALHDEMAAAM ARAERAGTHL AVLMIDLDRF
KPINDRHGHL VGDRVLKEVA RRLCHILRGG ETCARYGGDE FVVLVDDDVQ PSAAHHLAER
VVRAMSEPMQ IGPLSVTIGA TVGIARFPDD GRDADELLRK ADSALYRAKA ESRGGLSFYN
VGLDELVAER AALEQAMRDG LTRGEFVAYF QPIVELNSQR VQSVELLARW QHPQRGLLPP
AQFIALAEDA GLIGALMLSV LRNAFAELPA LPAHWRVSVN VAPQQIQDET LVPQLLALLA
EHGVPPARLD VELTETALVR DTSAARRVMR DLKLAGFTVT LDDFGTGHSS LAYLAELDFD
KIKIDRSFVH TLRERPQSAK VVDAIIGLSR SLGVPAVAEG IETEADATRL LRMGCALGQG
YLFGRPVPAG ELPGLGEGPR ATAA
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