Gene Mpe_A3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3325 
Symbol 
ID4786424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3530205 
End bp3531005 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID640091898 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_001022513 
Protein GI124268509 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID[TIGR03220] 2-oxopent-4-enoate hydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA ACGAAACCAT CGAACGCTAC GGTGACGAGC TGTACGAGGC GCTGCTCGCG 
CGCCGCGTCG TCGCGCCGCT GCTGGAGCGC GAACCGCAGA TCCGCGTCGA GGACGCCTAC
CGCATCCAGC AGCGCATGGT GGCGCGCCGC GTGGCGGCCG GCGAGCGCGT GGTCGGCAAG
AAGATCGGCG TGACCAGCAA GCCGGTGCAG GACTTCCTGG GCGTCTACGA ACCCGACTTC
GGCCAGCTCA CCTCGGGCAT GGCGCGCAGC GAGGCCGAGG GCGTGGACCT CGGCGCGCTG
ATCCAGCCCA AGGCCGAGGC CGAACTGGCC TTCGTGCTGG AGCGCGACCT GGTCGGGCCG
GGCGTGACCG CCGCCGACGT GATCCGCGCC ACCGCCTATG TCAGTCCCTG CTTCGAGATC
GTTGATTCGC GCATCCGCGA CTGGAAGATC AAGATCCAGG ACACGGTGGC CGACAACGCC
TCCTGCGGCG TCTACCTCAT CGGTGAGGCC AAGGCCCACC CGCGCCAGCT CGACGTCGCG
CTGGCCGGCA TGGTGCTCGA GAAGAACGGC GAACTGCACT CCACCGGCGT CGGTGCCGCG
GTGCAGGGCT CGCCGGTGCA TGCGGTGGCC TGGCTGGCCA ACACGCTGGG CGCGCTGGGG
TTGCCGTTTC GCGCGGGCGA GGTGATCCTG TCCGGCTCGC AGTCGGCGCT GGTGCCGGTG
ACCGACGGCG ACGAGCTGGT GTGCACCATC GGTGGCCTGG GCACCTGCCG CGCGCGTTTC
CATGGAAGGA GTGCCCTGTG A
 
Protein sequence
MMNNETIERY GDELYEALLA RRVVAPLLER EPQIRVEDAY RIQQRMVARR VAAGERVVGK 
KIGVTSKPVQ DFLGVYEPDF GQLTSGMARS EAEGVDLGAL IQPKAEAELA FVLERDLVGP
GVTAADVIRA TAYVSPCFEI VDSRIRDWKI KIQDTVADNA SCGVYLIGEA KAHPRQLDVA
LAGMVLEKNG ELHSTGVGAA VQGSPVHAVA WLANTLGALG LPFRAGEVIL SGSQSALVPV
TDGDELVCTI GGLGTCRARF HGRSAL