| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3310 |
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| Symbol | |
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| ID | 4786469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3517540 |
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| End bp | 3519303 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640091883 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001022498 |
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| Protein GI | 124268494 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCGC ACAAGACCCC GCCCCCCAAG AGCGCCGCCA CGCCGGCGAT CGACGACCTC
GTGTCGCGCA TCCACTTCGA CGCGCGCGAA GGCCGCATCT GGCTCGACGA GCAGCGCATG
CTGCTGATGC ACGTGTCGGG TCAGGGCGTG CTGCGGCAGG AGCTGATCGA GAGCCTGGGC
ATCGATCGCG CGCGCGGCCT GATCACGCGC GTGGGCTACA ACTCCGGCTC GCACGACGCC
GACCTCGCGC GCAAGCTGCG CGGCTCCACC CACCCCACCG AGGCCATGCT GGTCGGCCCG
CAGCTGCACA TGCTGGAGGG CGTGGCGCGC GTCGAGCCGG TGCGGCTCGA CATGAACGAG
GAGCACGGCC GCTTCTACGG CGAGTTCAAC TGGCACGGCT CGGCCGAGGC CGAAGAGCAC
ATCCGCCTCT ACGGCATCGG CACCGACGTG GCGTGCTGGC AGCAGGTGGG CTATGCCTCG
GGCTTCGTCA GCCGCTTCAT GGGCCGGCCG GTGATGTTCC GCGAGGTGCA GTGCTGCGCG
CAGGGCGCAC CGCACTGCGT GATCGTCGGC CGCCCGGTCG AGGACTGGGA GGACGCCGAC
GACGACCTGC GCTCGCTGCA GGCCGACAGC CTGAGCAGCG GCCTGAGCGC CGCCAACCGC
GGCGCCGCGG CGGCGCCGGA GGCGCGCTCG CTGCTCGGCG GCGAGGACGT GGTGGGCGTG
TCGGCCGGCT TCAACGCGGT GTGCCACATG ATCCGCCGCG CCGCCGACAC CCAGGCCACC
GTGCTGTTCC AGGGCGAGAG CGGCGTGGGC AAGGAGGTGC TGGCGCGCAG CCTGCACCGC
ATCGGCCCGC GCGCGGCCGG GCCCTTCGTC GCCATCAACT GCGCGGCCAT CCCCGAAGAG
CTGGTGGAGG CCGAGCTGTT CGGGGTGGAG AAGGGCGCCT ACACCGGCGC CGTGAGCAAC
CGGCCCGGCC GCTTCGAGCG CGCCGACGGC GGCACGCTGT TCCTCGACGA GATCGGCATC
CTGGCCTGGC CCGCGCAGGG CAAGCTGCTG CGCGCGCTGC AGGAGCGCGA GGTCGAGCGC
GTGGGCGGCA CGCAGGCGCG CAAGGTCGAC GTGCGCGTGG TGGCGGCCAG CAACCTGAAC
CTGCGCGAGG AGGTCAAGGC CGGCCGCTTC CGCGAGGACC TGTTCTTCCG CCTCAACGTG
CTGCCGGTGC GGGTGCCGCC GCTGCGCGAG CGGCGCGAGG ACATCCCGGT GTTCATGAAC
CACTTCCTGC ACAAGTTCAA CCAGCGCGAC GGCCGGCGCG TGAGCGGCTT CACCAGCCGC
GCGATCGACG CGATGCTGGC CTACGACTGG CCGGGCAACA TCCGCGAGCT CGAGAACCTG
GTGGAGCGCG GCGTGGTGCT GGCGCCCGAC CAGGGCGCCA TCGACACCGT GCACCTGTTC
TTCGGCGGCG AGCAGGTCGA CGGCGGCCTG CTCGCGCTCA AGCGCGACGG CTCGCTGCAC
GCCGGGCCCT CGCCGCTCGA CGCCGCGGCC GAGGGCGAAC CCGGCCCCCA CGGCCCGCAG
GAGCTGGGCC AGCGCGTGAT GGCGCTGCTG AGCGGCAGCG GCGACGTGTC CAGCGCGCCG
CTCGACCAGA TCGAGGCCGC GCTGATCCGC AGCGCCATGG CGCGCACCCA CGACAACCAG
TCCGCCGCGG CGCGGCTGCT GGGCATCACG CGCGCGCAGC TCATCTACCG GCTGCGCGCG
CTGGCACCGC CGCCGCAGGG CTGA
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| Protein sequence | MASHKTPPPK SAATPAIDDL VSRIHFDARE GRIWLDEQRM LLMHVSGQGV LRQELIESLG
IDRARGLITR VGYNSGSHDA DLARKLRGST HPTEAMLVGP QLHMLEGVAR VEPVRLDMNE
EHGRFYGEFN WHGSAEAEEH IRLYGIGTDV ACWQQVGYAS GFVSRFMGRP VMFREVQCCA
QGAPHCVIVG RPVEDWEDAD DDLRSLQADS LSSGLSAANR GAAAAPEARS LLGGEDVVGV
SAGFNAVCHM IRRAADTQAT VLFQGESGVG KEVLARSLHR IGPRAAGPFV AINCAAIPEE
LVEAELFGVE KGAYTGAVSN RPGRFERADG GTLFLDEIGI LAWPAQGKLL RALQEREVER
VGGTQARKVD VRVVAASNLN LREEVKAGRF REDLFFRLNV LPVRVPPLRE RREDIPVFMN
HFLHKFNQRD GRRVSGFTSR AIDAMLAYDW PGNIRELENL VERGVVLAPD QGAIDTVHLF
FGGEQVDGGL LALKRDGSLH AGPSPLDAAA EGEPGPHGPQ ELGQRVMALL SGSGDVSSAP
LDQIEAALIR SAMARTHDNQ SAAARLLGIT RAQLIYRLRA LAPPPQG
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