| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3295 |
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| Symbol | |
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| ID | 4786454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3502065 |
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| End bp | 3504101 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640091868 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001022483 |
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| Protein GI | 124268479 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.193265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.142457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC AGACCCCGAC ACCCCTCCGC TGCCACATCC TGCTCCGCGC GGTCGCACTT
GCCGCGATCA CCGGGGCCCT GGCCTTGCCC TCCGCGCCGG TCGCCGCGCA GACCACCAAC
GACACGGTTC TCGAAGCCCG CGAGGCGCTG CGCAAGCGCG ACAAGCCGCG CCTGGCGGCC
ACGCGTGCGG CGGCACTGGC CGCGAACCAC CCGCTCGCGA TGTGGCCCGA CTACTGGGAG
CTCGGCAACC GCCTCGCCGA TGCACAGCAG GACGAACTGA ATGCCTTCTA TGCGCGCTGG
CCGGGCACCT ATGTCGAGGA CCGGCTGCGC AACGACTGGC TGCTCGAGCT GGGCCGCCGT
CGCGACTGGG GCAACTTCCG CGCGGAATAC CCGCGCTTCA AGCTCGACGA CGATCGCGAG
GTGCGCTGCT ACGCGCTGCT GACGCGGCAC CTCGATGGCC AGGACGTGAC GGACGACGCC
CGCGCCGCCT GGTTCGCGCA ACGCGATGCC GACGACGGCT GCGCGCTGCT GGCCAGCACG
CTGTTCGATG CCAAGCGGAT CGGCCGCGAC GACGTCTGGC GCAAGACGCG GCTGGCGGTC
GAGGCCAACC GCCCCCGCAT GGCCCGCCAG GCCGCCGCGC TGCTGGGCGA CGACATGGCC
AATGCGGTCA GCGAACTGAA CGACAACCCG CAGCGCTACC TGACGCGCAA GGCCGCGACG
CAGGGCCGCG GTGCCAGCGA GCTGACCGCG CTGGCGCTGA TCCGCAGCGC CGCGAACGAC
CCCGACGTGG CGGCCACCGC GATGAACGAT CGCTGGGCCG CGCGGCTGCC GGCCGACCTG
TCCGCGTGGG TGTGGGCCAG CATCGGCAAG CAGGCGGCAC TCAAGCTCAG CAACAGCGCC
TCCGACCACT TCCAGCGTGC CGAGCTGACA CGCACCGGCA ACGTCGACGT GGCGCTGCCC
GACGACACGC TGGCCTGGAA GCTGCGCGCC GCGCTGCGCG CCAACAACGG CGCGGGCCGC
TGGCAGCAGG TGATGCAGGC GGTCACCGCG ATGAGCAGCA GCGAGCAGCG CGAACCCGCG
TGGATCTACT GGAAGGCACG CGCGCTGCAG GCGCTGGCCG GCAGCAGCCA GGACGGCGTC
GCGCTGGGTG CGCAGGCGCG CGAGCTGCTC GCGTCGATCG CGAGTCCGCT GCACTTCTAC
GGCAAGCTGG CCATGGAAGA CCTCGGGCAA CCGCTGGTCC TGCCCGCCGC ACCGGCACCG
CTCACGCCCG AGGAGCGCAA CGCCGCGGCC CAGCACCCCG GCCTGAAGCG CGCGCTGCTG
CTGATCGAGC TCGACCTGCG CAGCGAAGGC GTGCGCGAAT GGAACTTCTC GCTGTTCGGC
ATGGGCGAGC GCGAGCTGCT GGCCGCTGCC CAGCTGGCCT GCGAGCGCCA GGTGTGGGAC
CGCTGCATCA ACACCAGCGA GCGCACCCGC GAGCAGGTCG ACATGGCACA GCGCTTCCCC
ACGCCCTACC GCAGCGACGT GGTGGCGCGC GCGCGCGAGG CGGGGCTGGA CCCGGCCTAC
GTCTACGGCC TGATCCGCCA GGAGTCGCGC TTCATCACCA GCGCGCGTTC GTCGGTCGGC
GCCTCGGGGC TGATGCAGCT GATGCCGGCC ACCGCCAGGT GGACCGCCCG CAAGCTGGGC
ATCGACTACA CGCACGACCG CATCACCGAG CACGGCACCA ACCTGCGGCT CGGCACCGGC
TACCTGAAGA TGGTGCTCGA CAGCTTCGAC GGCTCGCAGG CCATGGCCGC GGCCGGCTAC
AACGCCGGCC CGAACCGGCC GCGCAAGTGG CGCGAGGGGC CGTCGCTGGA CGCGGCGGCC
TGGGCCGAGA ACATTCCCTT CACCGAGACG CGCGACTACG TGAAGAAGGT GCTCTCCAAC
GCCACCGACT ACGCCGCGCT GCTGAGCGGC CAGCCGCAGT CGCTGCGCGC GCGGCTGGGC
GGCGCGATCG GCCCGCACGC CGGCGCGGCC GATCCGGCCG AGCGCGAGCT GCCCTGA
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| Protein sequence | MTLQTPTPLR CHILLRAVAL AAITGALALP SAPVAAQTTN DTVLEAREAL RKRDKPRLAA
TRAAALAANH PLAMWPDYWE LGNRLADAQQ DELNAFYARW PGTYVEDRLR NDWLLELGRR
RDWGNFRAEY PRFKLDDDRE VRCYALLTRH LDGQDVTDDA RAAWFAQRDA DDGCALLAST
LFDAKRIGRD DVWRKTRLAV EANRPRMARQ AAALLGDDMA NAVSELNDNP QRYLTRKAAT
QGRGASELTA LALIRSAAND PDVAATAMND RWAARLPADL SAWVWASIGK QAALKLSNSA
SDHFQRAELT RTGNVDVALP DDTLAWKLRA ALRANNGAGR WQQVMQAVTA MSSSEQREPA
WIYWKARALQ ALAGSSQDGV ALGAQARELL ASIASPLHFY GKLAMEDLGQ PLVLPAAPAP
LTPEERNAAA QHPGLKRALL LIELDLRSEG VREWNFSLFG MGERELLAAA QLACERQVWD
RCINTSERTR EQVDMAQRFP TPYRSDVVAR AREAGLDPAY VYGLIRQESR FITSARSSVG
ASGLMQLMPA TARWTARKLG IDYTHDRITE HGTNLRLGTG YLKMVLDSFD GSQAMAAAGY
NAGPNRPRKW REGPSLDAAA WAENIPFTET RDYVKKVLSN ATDYAALLSG QPQSLRARLG
GAIGPHAGAA DPAERELP
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