| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3282 |
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| Symbol | prfC |
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| ID | 4786501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3490474 |
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| End bp | 3492117 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640091855 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001022470 |
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| Protein GI | 124268466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.600157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACG TTCAGATCGC CGATGAAGTC CAGCGCAGGC GCACCTTCGC GATCATCTCC
CACCCCGATG CCGGCAAGAC CACGCTGACC GAGAAGCTGC TGCTCTTCTC GGGCGCGATC
CACATCGCCG GCTCGGTGAA GGCGCGCAAG GCCAGCCGCC ATGCCACCTC CGACTGGATG
GAGATCGAGA AGCAGCGCGG CATCTCGGTC GCCAGCTCGG TGATGCAGAT GCTCTACCGC
GACTGCGTGA TCAACCTGCT CGACACCCCG GGCCACAAGG ACTTCTCCGA AGACACCTAC
CGCGTGCTGA CCGCGGTGGA CGCTGCGCTG ATGGTGATCG ACGCGGCCAA CGGCGTGGAG
CCGCAGACGC GGCGGCTGAT CGAGGTCTGC CGCCAGCGCG ACACGCCCAT CCTCACTTTC
GTCAACAAGA TGGACCGCGA AGGCAAGGAG CCGCTGGAAC TGCTCGACGA GATCGAGCAG
GAGCTCGGCA TGCCCTGCGT GCCGATGACC TGGCCGGTCG GCCAGGGCAA GGCCTTCGGC
GGCATCGTCG ACCTGCGCAA GCAGCAGATG CGTCTCTTCA AGGCCGGGGC CGACAAGCGC
AGCGACGAGG GCGACGAGGT GGTGCCGCTG TCGCAGGCCG ACACGCTGCG CGCCCGCTTC
GGGCACGACT ACGCGCTGGC CGAGCAGAAC ATCGAACTGC TGACCGCCGC CGCACCGGCC
TTCGACGAGG CGGCCTTCGT GGCAGCGAAG CAGACGCCGG TGTTCTTCGG TTCCGGCGTC
AACAACTTCG GCGTGCAGGA GGTGCTGGAC GCGCTGGTCG ACCTGGCGCC GCCGCCGGCC
TCGCGCCACG TGACGCGGGC CGACGGCAGC GAGCACGAGG TGCCGCCGCA GTCGGCCGGG
TTCTCCGGCG TGGTATTCAA GGTGCAGGCC AACATGGACC CGTCGCACCG CGACCGCATC
GCCTTCGTGC GCGTCAACTC CGGGCGCTAC ACCTCGGGCA TGAAGCTGCG CGTGCAGCGC
ACCGCCAAGG AGCTGAGGCC CACCTCGGTG GTCACGTTCC TGTCGCAGCG GCGCGAGGCG
GTCGAGGAGG CCTACGCGGG CGACATCATC GGCTTCACCA CCCACGGTGG CGTGCAGCTC
GGCGACACCA TCACCGACAG CGAGGCGCCG GCGAGTTTCG GCACCTACAC CGGCCTGCCG
TTCTTCGCGC CCGAGCTGTT CCAGACCGTC GAGCTGGCCA ACCCGATGAA GAGCAAGCAG
CTGCAGCAGG GCCTGCTGCA GCTCGGCGAG GAGGGCGCGA TCCAGGTGTT CCGGCCCACG
GTCGGCGGCT CGATGCTGCT GGGCGCGGTC GGCCAGCTGC AGTTCGAGGT GGTGCAGCAC
CGCCTGAAGG CCGAGTACAG CGTGGATGTG CGCCTCACCG GCAGCCGCTT CCACGGCGCG
CGCTGGGTGA CCTGCGACGA CGACGCGGCG ATGCGCAAGT TCACCGACGA GGCCGCCAGC
AAGCTCGCAC TCGACGCGGC CGACACGCTG GCCTACCTGA TGACCTCGCC CTACGACCTG
CGCCTCACGC AGGACCGCCA TCCCAAGGTG GTGTTCCACC CGCTGCGCGA GCACGCCGGC
CTGGCGCTGC AGCAGGCCGC TTGA
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| Protein sequence | MSNVQIADEV QRRRTFAIIS HPDAGKTTLT EKLLLFSGAI HIAGSVKARK ASRHATSDWM
EIEKQRGISV ASSVMQMLYR DCVINLLDTP GHKDFSEDTY RVLTAVDAAL MVIDAANGVE
PQTRRLIEVC RQRDTPILTF VNKMDREGKE PLELLDEIEQ ELGMPCVPMT WPVGQGKAFG
GIVDLRKQQM RLFKAGADKR SDEGDEVVPL SQADTLRARF GHDYALAEQN IELLTAAAPA
FDEAAFVAAK QTPVFFGSGV NNFGVQEVLD ALVDLAPPPA SRHVTRADGS EHEVPPQSAG
FSGVVFKVQA NMDPSHRDRI AFVRVNSGRY TSGMKLRVQR TAKELRPTSV VTFLSQRREA
VEEAYAGDII GFTTHGGVQL GDTITDSEAP ASFGTYTGLP FFAPELFQTV ELANPMKSKQ
LQQGLLQLGE EGAIQVFRPT VGGSMLLGAV GQLQFEVVQH RLKAEYSVDV RLTGSRFHGA
RWVTCDDDAA MRKFTDEAAS KLALDAADTL AYLMTSPYDL RLTQDRHPKV VFHPLREHAG
LALQQAA
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