Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3260 |
Symbol | |
ID | 4786479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3466808 |
End bp | 3467770 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640091833 |
Product | putative 2-hydroxyacid dehydrogenase family protein |
Protein accession | YP_001022448 |
Protein GI | 124268444 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.238843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACTG ACATGAGCCA TTCCGTGGTG TTCCTGGACC GTGAATCGCT GAAGGCGAAG GTCCGCAAGC CGGCGCAGGC CGAGAGCTAT GTGGAGCACG CCAAGACCTC GGTCGACGAG GTGGTCGCGA AGCTGCAGGG CGCGACCGTG GCGATCACCA ACAAGGTGCC GCTGCGGGCC GAGACGCTGA AGCAGCTGCC GCAGTTGAAG ATGATCGCGG TGGCCGCCAC CGGCTACGAC GTGATCGACG TGCCCTACTG CAAGGAGCAC GGCATCGCGG TCGCCAACAT CCGCAACTAC GCGGTGCACA CGGTGCCGGA GCATGCCTTC GCGCTGATCC TGGCGTTGCG TCGCAACATC CTGGCCTACC GGCAGGACGT GGAGGCGGGC GTGTGGCAGA AGTCGGACCA GTTCTGCTTC TTCACGCACG ACATCGGCGA CCTGCACGGC GCCACGCTGG GCATCATCGG CGAGGGCGCG ATCGGCCAGG GCACCGCGGC GATCGCGCGT GGCTTCGGCA TGAAGGTGCT CTTCGCCGAC CACGAGCCGC CGAAGATGCC GGGCGTTGAG TTCACGCCCT TCGAGCAGGT GCTTGCCGAG AGCGACGTGA TCTCGATGCA CTGCCCGCTG ACGCCGTCGA CGCGCAACCT GATCGGGCTG GAGCAGATGC GCCGCATGAA GCGCAATGCG CTGCTGATCA ACACCTCGCG CGGCGGCCTG GTCGACGAGG CGGCGCTGAT CCAGGCGCTC GACGAAGGCC TGATCGCCGG CGCCGGCTTC GACGTGCTCA CCACCGAGCC GCCGAAGAAC GGCCACCCGC TGCTGGACGT GCGGCGCCCG AACTTCATCC TCACACCGCA CGTGGCCTGG GCCTCGGACG GCGCGATGCA GTTCCTGGCC GACCAGCTCA TCGACAACAT CGATCGGTGG GCCGAAGGCC GACCGCAGCA TCTGGTGACC TGA
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Protein sequence | METDMSHSVV FLDRESLKAK VRKPAQAESY VEHAKTSVDE VVAKLQGATV AITNKVPLRA ETLKQLPQLK MIAVAATGYD VIDVPYCKEH GIAVANIRNY AVHTVPEHAF ALILALRRNI LAYRQDVEAG VWQKSDQFCF FTHDIGDLHG ATLGIIGEGA IGQGTAAIAR GFGMKVLFAD HEPPKMPGVE FTPFEQVLAE SDVISMHCPL TPSTRNLIGL EQMRRMKRNA LLINTSRGGL VDEAALIQAL DEGLIAGAGF DVLTTEPPKN GHPLLDVRRP NFILTPHVAW ASDGAMQFLA DQLIDNIDRW AEGRPQHLVT
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