Gene Mpe_A3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3260 
Symbol 
ID4786479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3466808 
End bp3467770 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID640091833 
Productputative 2-hydroxyacid dehydrogenase family protein 
Protein accessionYP_001022448 
Protein GI124268444 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.238843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACTG ACATGAGCCA TTCCGTGGTG TTCCTGGACC GTGAATCGCT GAAGGCGAAG 
GTCCGCAAGC CGGCGCAGGC CGAGAGCTAT GTGGAGCACG CCAAGACCTC GGTCGACGAG
GTGGTCGCGA AGCTGCAGGG CGCGACCGTG GCGATCACCA ACAAGGTGCC GCTGCGGGCC
GAGACGCTGA AGCAGCTGCC GCAGTTGAAG ATGATCGCGG TGGCCGCCAC CGGCTACGAC
GTGATCGACG TGCCCTACTG CAAGGAGCAC GGCATCGCGG TCGCCAACAT CCGCAACTAC
GCGGTGCACA CGGTGCCGGA GCATGCCTTC GCGCTGATCC TGGCGTTGCG TCGCAACATC
CTGGCCTACC GGCAGGACGT GGAGGCGGGC GTGTGGCAGA AGTCGGACCA GTTCTGCTTC
TTCACGCACG ACATCGGCGA CCTGCACGGC GCCACGCTGG GCATCATCGG CGAGGGCGCG
ATCGGCCAGG GCACCGCGGC GATCGCGCGT GGCTTCGGCA TGAAGGTGCT CTTCGCCGAC
CACGAGCCGC CGAAGATGCC GGGCGTTGAG TTCACGCCCT TCGAGCAGGT GCTTGCCGAG
AGCGACGTGA TCTCGATGCA CTGCCCGCTG ACGCCGTCGA CGCGCAACCT GATCGGGCTG
GAGCAGATGC GCCGCATGAA GCGCAATGCG CTGCTGATCA ACACCTCGCG CGGCGGCCTG
GTCGACGAGG CGGCGCTGAT CCAGGCGCTC GACGAAGGCC TGATCGCCGG CGCCGGCTTC
GACGTGCTCA CCACCGAGCC GCCGAAGAAC GGCCACCCGC TGCTGGACGT GCGGCGCCCG
AACTTCATCC TCACACCGCA CGTGGCCTGG GCCTCGGACG GCGCGATGCA GTTCCTGGCC
GACCAGCTCA TCGACAACAT CGATCGGTGG GCCGAAGGCC GACCGCAGCA TCTGGTGACC
TGA
 
Protein sequence
METDMSHSVV FLDRESLKAK VRKPAQAESY VEHAKTSVDE VVAKLQGATV AITNKVPLRA 
ETLKQLPQLK MIAVAATGYD VIDVPYCKEH GIAVANIRNY AVHTVPEHAF ALILALRRNI
LAYRQDVEAG VWQKSDQFCF FTHDIGDLHG ATLGIIGEGA IGQGTAAIAR GFGMKVLFAD
HEPPKMPGVE FTPFEQVLAE SDVISMHCPL TPSTRNLIGL EQMRRMKRNA LLINTSRGGL
VDEAALIQAL DEGLIAGAGF DVLTTEPPKN GHPLLDVRRP NFILTPHVAW ASDGAMQFLA
DQLIDNIDRW AEGRPQHLVT