Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3238 |
Symbol | |
ID | 4786517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3442092 |
End bp | 3443951 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640091811 |
Product | signal transduction histidine kinase-like protein |
Protein accession | YP_001022426 |
Protein GI | 124268422 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGCC ACCTCTCCGC GCCCGGGCGC CTGTTTCTGC TGCTGTGGCT GGGCCTGTGC GGCGGCCTGC CGTTCGCCGC TCCGACGGTC GCCCAGACGA CGGACCTGCT GACGCTGCGC AGCGCCCAGG TCGCCAGCGT GCCGTCACTG ACGCTCGCGC CGCCGGTCGG CGGCGGTTTC GAGACCGTGG CACTCCCGGA CGACTGGTCG GCGCAGGGCC CGGCGGGCGA ACAGGTCAAG TGGTACCGGC TGCGCTTCGA TGCGCCGCAG CAGGCTGCGG GCGCCTTGCT CTCCGCCTAC ATCCCGCGGG TGTGCTCGAA CCTCGAGGTC TACCTCAATG GCCAGTTGCT CTATCGCGGT GGCAGCCTGC GCGAGCCGGT CACGCGCAAC TGCTACCAGT CGCAGCTGGT CAGCCTGCCC GCCGGTCTGC TGCATGCCGC CGGCAACGAA CTGGCGCTCC AGGTGGTGGG CTACCCGCTG CCGCGCGTGG CGGGGCGTCA GCGTGCCGGT GGCTTGTCGG AGGTGCTGAT CGGGCCCTAT CCGCAGTTGC GCGAGCTGCA TGAGCGCCAG CGCTTCTGGA ACGTGAGCTT CGCGCAGATC GTGGCGGCGA CGCTCGTGAT GATCGGCGTG GTGATGCTGG CGCTGGGCTG GGTGCGGCGC GTGTCGCACC TGAAGTACTT CGGCGTGGTG TCGCTGGGCT GGGCGCTGCT AAGCGCTCGC ATCTGGTGGC GCGACATCCC GCTGCCGAAC GGCACGCTGG AACTGCTGAG CTGCATCGCC TTCGTCCCGC TGTCGGTGTG TGCGGTGCTG TTCCTGCTGC GCTACTGCGG CATGAAGTGG CGCGCCGTCG ACATCGCCCT GTGGACCCAG TGCCTGGTGA TGCCGGCCGG CCTGTTGCTG GCCGGGCCGG AGCGGCTGTT CTCAGGGGCG GTGCTGTGCT ATTCCGTGCT GGCGCTGGAG GTGTTCGCGG CGATCGGCTT CTGCCTCGCG CACGTGTGGC GCACGCGGCG CGGCGAGTTC TGGCTGCTGG GCTCGATCCT CGCACTGGTC GTGGTGGTGA TCGGCATCGA GGTCGGTGTG CAGGACAGCT TCCTCAAGCT GCCCAATGTC CATGTCATCC ACTTCGCGAT CCCGCTGCTG TTCTGCGTGC TGGCGTTCCG GCTGGTGCAG ACCTTCGCGA ACGCGCTGAC CGCCGCCGAG ACGGCGCGCC AGCAGCTCGA GCAGCGCGTC TACGAGATCT CGGCCGAGAT CGAGCGCAAC TTCTCGCACC TGGCCGAGGT GCGGGTGGAG CAGGTGGCCG AGAAGGAGCG CAAGCGCATC GCCGCCGACC TGCACGACGA CCTGGGTGCC AAGCTGCTGA CCATCGTCCA CACCAGCACC GACGAGCGTA TCTCGACGCT GGCGCGCGAG GCGCTCGAGG AGATGCGGCT GTCGGTGCGT GGCATCGCCG GCAAGCCGGT GCAGCTGACC GACGCGCTGG CCGACTGGCG TGCCGAGACG GTGTCGCGGC TGGGCGATGC CGGCATCGAG ATCGAGTGGC ACAGCACCGA GCCGACCACG CCGCGCACCC TGGCGGCCCG TTCCTATGTG CAGACGACGC GCGTGCTGCG CGAGGCCACG AGCAACCTCA TCAAGCACAG CGGCGCCTCG CGGGCGACCG TCACCTGCCG CATCGGCGAC GAGTTCCAGC TGGTGATCCG AGACAACGGG CGCGGCATCC CGCTCGAACT CGACGGCCGC CTCGACCGCG GCCACGGCAT GGCCAGCATG AAGCAACGCG CCAAGCAGAT GCAGGGCCAG TGCCTGATCG AGTCGGGCCC GGGCTATGGA ACCGTGATCC GGCTCACGCT TCCGCTGTGA
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Protein sequence | MLRHLSAPGR LFLLLWLGLC GGLPFAAPTV AQTTDLLTLR SAQVASVPSL TLAPPVGGGF ETVALPDDWS AQGPAGEQVK WYRLRFDAPQ QAAGALLSAY IPRVCSNLEV YLNGQLLYRG GSLREPVTRN CYQSQLVSLP AGLLHAAGNE LALQVVGYPL PRVAGRQRAG GLSEVLIGPY PQLRELHERQ RFWNVSFAQI VAATLVMIGV VMLALGWVRR VSHLKYFGVV SLGWALLSAR IWWRDIPLPN GTLELLSCIA FVPLSVCAVL FLLRYCGMKW RAVDIALWTQ CLVMPAGLLL AGPERLFSGA VLCYSVLALE VFAAIGFCLA HVWRTRRGEF WLLGSILALV VVVIGIEVGV QDSFLKLPNV HVIHFAIPLL FCVLAFRLVQ TFANALTAAE TARQQLEQRV YEISAEIERN FSHLAEVRVE QVAEKERKRI AADLHDDLGA KLLTIVHTST DERISTLARE ALEEMRLSVR GIAGKPVQLT DALADWRAET VSRLGDAGIE IEWHSTEPTT PRTLAARSYV QTTRVLREAT SNLIKHSGAS RATVTCRIGD EFQLVIRDNG RGIPLELDGR LDRGHGMASM KQRAKQMQGQ CLIESGPGYG TVIRLTLPL
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