Gene Mpe_A3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3238 
Symbol 
ID4786517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3442092 
End bp3443951 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content70% 
IMG OID640091811 
Productsignal transduction histidine kinase-like protein 
Protein accessionYP_001022426 
Protein GI124268422 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCC ACCTCTCCGC GCCCGGGCGC CTGTTTCTGC TGCTGTGGCT GGGCCTGTGC 
GGCGGCCTGC CGTTCGCCGC TCCGACGGTC GCCCAGACGA CGGACCTGCT GACGCTGCGC
AGCGCCCAGG TCGCCAGCGT GCCGTCACTG ACGCTCGCGC CGCCGGTCGG CGGCGGTTTC
GAGACCGTGG CACTCCCGGA CGACTGGTCG GCGCAGGGCC CGGCGGGCGA ACAGGTCAAG
TGGTACCGGC TGCGCTTCGA TGCGCCGCAG CAGGCTGCGG GCGCCTTGCT CTCCGCCTAC
ATCCCGCGGG TGTGCTCGAA CCTCGAGGTC TACCTCAATG GCCAGTTGCT CTATCGCGGT
GGCAGCCTGC GCGAGCCGGT CACGCGCAAC TGCTACCAGT CGCAGCTGGT CAGCCTGCCC
GCCGGTCTGC TGCATGCCGC CGGCAACGAA CTGGCGCTCC AGGTGGTGGG CTACCCGCTG
CCGCGCGTGG CGGGGCGTCA GCGTGCCGGT GGCTTGTCGG AGGTGCTGAT CGGGCCCTAT
CCGCAGTTGC GCGAGCTGCA TGAGCGCCAG CGCTTCTGGA ACGTGAGCTT CGCGCAGATC
GTGGCGGCGA CGCTCGTGAT GATCGGCGTG GTGATGCTGG CGCTGGGCTG GGTGCGGCGC
GTGTCGCACC TGAAGTACTT CGGCGTGGTG TCGCTGGGCT GGGCGCTGCT AAGCGCTCGC
ATCTGGTGGC GCGACATCCC GCTGCCGAAC GGCACGCTGG AACTGCTGAG CTGCATCGCC
TTCGTCCCGC TGTCGGTGTG TGCGGTGCTG TTCCTGCTGC GCTACTGCGG CATGAAGTGG
CGCGCCGTCG ACATCGCCCT GTGGACCCAG TGCCTGGTGA TGCCGGCCGG CCTGTTGCTG
GCCGGGCCGG AGCGGCTGTT CTCAGGGGCG GTGCTGTGCT ATTCCGTGCT GGCGCTGGAG
GTGTTCGCGG CGATCGGCTT CTGCCTCGCG CACGTGTGGC GCACGCGGCG CGGCGAGTTC
TGGCTGCTGG GCTCGATCCT CGCACTGGTC GTGGTGGTGA TCGGCATCGA GGTCGGTGTG
CAGGACAGCT TCCTCAAGCT GCCCAATGTC CATGTCATCC ACTTCGCGAT CCCGCTGCTG
TTCTGCGTGC TGGCGTTCCG GCTGGTGCAG ACCTTCGCGA ACGCGCTGAC CGCCGCCGAG
ACGGCGCGCC AGCAGCTCGA GCAGCGCGTC TACGAGATCT CGGCCGAGAT CGAGCGCAAC
TTCTCGCACC TGGCCGAGGT GCGGGTGGAG CAGGTGGCCG AGAAGGAGCG CAAGCGCATC
GCCGCCGACC TGCACGACGA CCTGGGTGCC AAGCTGCTGA CCATCGTCCA CACCAGCACC
GACGAGCGTA TCTCGACGCT GGCGCGCGAG GCGCTCGAGG AGATGCGGCT GTCGGTGCGT
GGCATCGCCG GCAAGCCGGT GCAGCTGACC GACGCGCTGG CCGACTGGCG TGCCGAGACG
GTGTCGCGGC TGGGCGATGC CGGCATCGAG ATCGAGTGGC ACAGCACCGA GCCGACCACG
CCGCGCACCC TGGCGGCCCG TTCCTATGTG CAGACGACGC GCGTGCTGCG CGAGGCCACG
AGCAACCTCA TCAAGCACAG CGGCGCCTCG CGGGCGACCG TCACCTGCCG CATCGGCGAC
GAGTTCCAGC TGGTGATCCG AGACAACGGG CGCGGCATCC CGCTCGAACT CGACGGCCGC
CTCGACCGCG GCCACGGCAT GGCCAGCATG AAGCAACGCG CCAAGCAGAT GCAGGGCCAG
TGCCTGATCG AGTCGGGCCC GGGCTATGGA ACCGTGATCC GGCTCACGCT TCCGCTGTGA
 
Protein sequence
MLRHLSAPGR LFLLLWLGLC GGLPFAAPTV AQTTDLLTLR SAQVASVPSL TLAPPVGGGF 
ETVALPDDWS AQGPAGEQVK WYRLRFDAPQ QAAGALLSAY IPRVCSNLEV YLNGQLLYRG
GSLREPVTRN CYQSQLVSLP AGLLHAAGNE LALQVVGYPL PRVAGRQRAG GLSEVLIGPY
PQLRELHERQ RFWNVSFAQI VAATLVMIGV VMLALGWVRR VSHLKYFGVV SLGWALLSAR
IWWRDIPLPN GTLELLSCIA FVPLSVCAVL FLLRYCGMKW RAVDIALWTQ CLVMPAGLLL
AGPERLFSGA VLCYSVLALE VFAAIGFCLA HVWRTRRGEF WLLGSILALV VVVIGIEVGV
QDSFLKLPNV HVIHFAIPLL FCVLAFRLVQ TFANALTAAE TARQQLEQRV YEISAEIERN
FSHLAEVRVE QVAEKERKRI AADLHDDLGA KLLTIVHTST DERISTLARE ALEEMRLSVR
GIAGKPVQLT DALADWRAET VSRLGDAGIE IEWHSTEPTT PRTLAARSYV QTTRVLREAT
SNLIKHSGAS RATVTCRIGD EFQLVIRDNG RGIPLELDGR LDRGHGMASM KQRAKQMQGQ
CLIESGPGYG TVIRLTLPL