| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3232 |
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| Symbol | |
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| ID | 4786511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3434768 |
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| End bp | 3436597 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640091805 |
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| Product | hypothetical protein |
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| Protein accession | YP_001022420 |
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| Protein GI | 124268416 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0129967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCTT TCCGATTCGC TGTCCTGGCC CTCGCGGCCT CCAGCGTTCT TGCCGCGACG
GCGTGGGCCC AGCCCGCTCC GGCGGAAGCG CCGGCATCCG GGCCGGGCGC TGCGGCACCG
GTGGAAAATT CGGTCCTCGA CGCACCGCTG TTCTACCAGT TGCTGATCGG CGAGATGGAG
CTCAGCCAGG GCGATGCCGG TACCAGCTAC CAGGTCCTGC TGGATGCGGC CCGCAAGACC
CGCGACGAGC GCCTGTTCCG GCGCGCCACC GAAGTCGCTT TGCAGGCACA GGCCGGCGAG
CAGGCGCTCG ATGCGGCACG CGCCTGGCGC CAGGCCGTGC CCGGCTCGAT CGACGCCCAC
CGCTTCGAGG TGCAGTTGCT GGTCGCGTTG AATCGCACCG CCGAAACCGT GCAGCCGCTG
CGGGCCACGC TGGCGCTGGT GCCGCCGGCC CAGCGGCCGG CGGCCATCGG GTCCTTGCCT
GGCTATTTCT CGCGCACCAC CGATCGCAAG GCGACCACGG CGGTGCTCGA ACAGGTGCTG
CTGCCCTATG CAGAGCAGCG CTCGGCGGGC GAGCCGCAAG CCACCGCGGT GGCCGCCTGG
GTGGCGCTGG GCCGCAGCCG GCTGGCCGCC GGCGATGCGG CGCGCGCGCT CGACGCCGCG
CGCCGTGGTC AAGCGCTGAG TCCGCGGTCG GAGGCCGTGG CGCTGCTCGC CATTGAACTG
ATGCCGACCG AGCAGCGGGC CGAGTCGCTG GTCACGGCCT TTCTCGAGGC CCAGCCACCG
GCTCCGGCCG CCACGCGCAG CGCGGTGCGG CTGGTCTATG CCCGCACGCT GGCTGTCGCG
CAGCGCTATG CGGACGCCGC GCCGCAGCTC GAGGCGGTGA CGCGCGACGC GCCGCAGTTT
GTCGACGCCT GGCTGACGCT GGGCGCCTTG CGGCTGGAAC TGAAGCAGCC GGCCGAGGCC
GAAGCGGCGC TGCGCGAGTA CCTCGCGCGC CTCGAGGCCG GCAGCGAGGC GGCATCGACC
GAAGCGGCCG ATGCCACGCA GGACGAGGAC GCCGCCACGC CCATGCAGCG TCTGACGCAG
GCCTACCTGC TGTTGGCCCA GGCCGCCGAG CAGCGGCGCG ACTTCAAGGC CGCCGAGGGC
TGGCTGGCCA AGGTCGACAG CTCCCAGGCA CTGACGGTGC AATCGCGGCG CGCATCGTTG
CTGGCGCAGC AGGGCAAGCT CGCCGAGGCG CGCAGCCTGA TCCGCGCGCT GCCGGAACGG
CAGCCGGAGG ACGCGCGCTC CAAGCTACTG GTGGAGGCGC AACTGCTGCG CGACCAGAAG
CAGTGGTCGG AGGCACTGGG CGTCCTGACC GAGGCCAACG ACCGCTACCG CGACGACACC
GACCTGCTGT ACGAGCAGGC GATGATGGCC GAGAAGCTCG ACCGCATGAC CGAGATGGAG
CAGTTGCTGC GTCGCGTGAT CGCGCTGAAG CCGCAGCAGC CGCAGGCCTA CAACGCGCTG
GGCTACTCGC TCGCTGATCG CAACCAGCGC CTGCCGGAAG CGCGCCAGCT GATCATCAAG
GCCCTGGAGC TGTCGCCGGG CGATCCGTTC CTGATCGACA GCCTGGGCTG GGTCGAGTAC
CGGCTCGGCA ACCATGACGA GGCGATCCGC TGGTTGCGGC AGGCACACGG CGCACGACCG
GACACCGAGA TCGCCGCGCA CCTGGGTGAG GTGCTCTGGG TCAGTGGCCG GCGCGACGAG
GCTCGTCGGA TCTGGGCCGA GGCCCGGGCC CGCGACGCCA CGAACGACGT GCTGAAGGAA
ACCCTGGCGC GGCTCAAGGT CGATCTGTGA
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| Protein sequence | MAPFRFAVLA LAASSVLAAT AWAQPAPAEA PASGPGAAAP VENSVLDAPL FYQLLIGEME
LSQGDAGTSY QVLLDAARKT RDERLFRRAT EVALQAQAGE QALDAARAWR QAVPGSIDAH
RFEVQLLVAL NRTAETVQPL RATLALVPPA QRPAAIGSLP GYFSRTTDRK ATTAVLEQVL
LPYAEQRSAG EPQATAVAAW VALGRSRLAA GDAARALDAA RRGQALSPRS EAVALLAIEL
MPTEQRAESL VTAFLEAQPP APAATRSAVR LVYARTLAVA QRYADAAPQL EAVTRDAPQF
VDAWLTLGAL RLELKQPAEA EAALREYLAR LEAGSEAAST EAADATQDED AATPMQRLTQ
AYLLLAQAAE QRRDFKAAEG WLAKVDSSQA LTVQSRRASL LAQQGKLAEA RSLIRALPER
QPEDARSKLL VEAQLLRDQK QWSEALGVLT EANDRYRDDT DLLYEQAMMA EKLDRMTEME
QLLRRVIALK PQQPQAYNAL GYSLADRNQR LPEARQLIIK ALELSPGDPF LIDSLGWVEY
RLGNHDEAIR WLRQAHGARP DTEIAAHLGE VLWVSGRRDE ARRIWAEARA RDATNDVLKE
TLARLKVDL
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