Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3216 |
Symbol | pilR |
ID | 4786555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3420162 |
End bp | 3421775 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640091789 |
Product | type IV pilus expression regulatory protein |
Protein accession | YP_001022404 |
Protein GI | 124268400 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.422678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGG CCTCGCATTT CAGCCTGCTG GTGGTCGACG ACGAGCCTGA CCTGCGCACC CTCTACGAGC TGACGCTGCT GCGCGAGGGC TACGAGATCG AGACCGCAGC CTGTGTCGAG GACGCCTGGG CGCAGCTCGC CGACCGTACG TTCAGCGCGG TGATCACCGA CATGCGTCTG CCCGACGGCA GCGGGCTCGA CCTGCTGCAT CGCCTGGAGG AAGCCGGGCG CCGCGAGAAG ACCATCGTCA TCACCGCCTA CGGCTCGGCG GAAAGCGCCG TCGAGGCGCT GAAGGCCGGC GCCTACGACT ACCTGACCAA GCCGGTCGAC CTGAAACTGT TCCGCAGCGT CGTGGCGTCT GCCCTCGGTC GGGCCGCGGC CAGCGGTCCG ACGGTGCAGC CCGATCAGTT GCCGTCCGAG TCCGGGGCGG CGCGGCCCTC GCGCGCCGGC GTTGCCGCAC GCCCGGTGCC GACGATCGTG ATCGGCCCGG CCGCTGCGGT GGTCCCTCCG GCCGGCGCGC TGGCGCGGAT GGCAGGCAAC TCGGCCCCGA TGCAGCAGGT GCGTTCGCTG ATCGAGAAGG TCTCGCGCAG CATGGCACCG GTGCTGGTGC ATGGCGAGTC CGGCACCGGC AAGGAGCTGG TCGCACGGGC GATCCACGAC AGCGGCGTGC GCCGGAGTCA GCCCTTCATT GCGGTGAACT GCGGGGCGAT CCCTGAGCAG TTGCTGGAAG CCGAGTTCTT CGGCTACCGA CGCGGTGCGT TCACGGGGGC GAACGAGGAC CGCGACGGTT TCTTCCAGGC CGCGCGTGGC GGCACGCTGT TCCTCGACGA GATTGGTGAT CTGCCGCTGT CGATGCAGAG CAAGCTGCTG CGCTCGATCC AGGAACGCTC GGTGCGGCCG GTGGGCGCGA CGACGGAGAC GGCGCTGGAC GTTCGCATCG TCAGCGCGAC ACACAAGAAC CTGGCGGCCG ACGTGCAGGC GGGGCGCTTC CGCCAGGACC TGTACTACCG GCTCAACGTG ATCCAGATCC GGGTGCCGCC GCTGCGCGAG CGGCTCGAGG ATCTGCCGGC GATCTGCGAG CGCGTGTTGG AGCGCATCGC CGCCGACGCC GGAGTCAGTC CGCCGCCGCG GCTGACGCGT GACGCGCTCG CCTACTTGCT GCGCTACCCC TTCGGCGGCA ACGTCCGCGA ACTCGAGAAC CTGCTGCACC GGGCCGTCGC GCTCTGCGAT GGCGATGTGA TCGATGTCGG CGACCTCGAT CTGCCCGAGT CGGCGTTCAG CGACAGCGGG CGTGCCGAGC TGGCGGCGCT GCCAGCGGAT GTGCCGCCGC CGAGCGCCGC CGAGTTCCCG GCGAGCGCGG CGCTGCCGAC GCCGTTGCCG GACGATCTCG CCGCCTACCT CGACGGCGTC GAGCGCGACA TCCTCGTGCG TGCGCTGGAG CGTTACCGCT TCAATCGCAC TGCTGCAGGC GCCAGCCTCG GTCTCTCGCT GCGACAGATG CGCTATCGCA TGGCGCGGCT GGGGGTCATG GTCGCCGAGC ATGGCGTGGC CATCGGGCCG GGTGCCGACG ACTCGGATGA CGAACTGCCG CCCGCCGGAT CGGGGCGGGC GTGA
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Protein sequence | MSPASHFSLL VVDDEPDLRT LYELTLLREG YEIETAACVE DAWAQLADRT FSAVITDMRL PDGSGLDLLH RLEEAGRREK TIVITAYGSA ESAVEALKAG AYDYLTKPVD LKLFRSVVAS ALGRAAASGP TVQPDQLPSE SGAARPSRAG VAARPVPTIV IGPAAAVVPP AGALARMAGN SAPMQQVRSL IEKVSRSMAP VLVHGESGTG KELVARAIHD SGVRRSQPFI AVNCGAIPEQ LLEAEFFGYR RGAFTGANED RDGFFQAARG GTLFLDEIGD LPLSMQSKLL RSIQERSVRP VGATTETALD VRIVSATHKN LAADVQAGRF RQDLYYRLNV IQIRVPPLRE RLEDLPAICE RVLERIAADA GVSPPPRLTR DALAYLLRYP FGGNVRELEN LLHRAVALCD GDVIDVGDLD LPESAFSDSG RAELAALPAD VPPPSAAEFP ASAALPTPLP DDLAAYLDGV ERDILVRALE RYRFNRTAAG ASLGLSLRQM RYRMARLGVM VAEHGVAIGP GADDSDDELP PAGSGRA
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