| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3197 |
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| Symbol | |
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| ID | 4786536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3400323 |
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| End bp | 3401672 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640091770 |
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| Product | putative UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase transmembrane protein |
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| Protein accession | YP_001022385 |
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| Protein GI | 124268381 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0499245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATTC ACATCCTCGG CATCTGCGGC ACCTTCATGG GCGGCCTGGC CGCACTGGCT
CGCGAGGCCG GGCACCGGGT CACCGGCTGC GATGCCAACG TCTACCCGCC GATGAGCGAC
CAGCTCCGCG CGCTGGGCAT CGAGCTGATC GAGGGCTGGG ACGTGCAGCA GCTCGCGCTG
AAGCCCGACC TGTACGTGAT CGGCAACGTG GTCTCGCGCG GCAACGCGCT GATGGAGGCG
ATCCTCGACG CCGGCCTGCC CTACACCAGC GGACCGCAAT GGCTGGCCGA GCACGTGCTG
CAGGGGCGAC ATGTGCTGGC GGTCGCCGGC ACGCACGGCA AGACCACCAC AACCTCGATG
CTGGCCTGGA TCCTGGAGAA CAACGAGCGC CGGCCCGGCT TCCTGGTCGG CGGCGTGCCG
CAGAACTTCG AGGTCAGCGC ACGGCTGGGC GAGGGCCAGC CCTTCGTGAT CGAAGCCGAC
GAATACGACA CCGCGTTCTT CGACAAGCGC AGCAAGTTCG TGCACTATCG GCCGCGCACC
GCGGTCCTGA ACAACCTGGA GTTCGACCAC GCCGACATCT TCGCGGACCT GGCGGCCATC
GAGACCCAGT TCCACCACCT GCTGCGCACG GTGCCGGCCA GTGGACGCGT GATCGTCAAC
GCGCGCGAGG AAAGCCTGGC GCGCGTGCTC GAGCGCGGCT GCTGGAGCGA CGTCCAGCGC
TTCGGCGTGC GCGGCGACGT GCCCGGCTTC CGGGCCCGCG GCGAGCCGCA CAGCTTCGAC
GTGCTGAAGT CCGGCGTGCA GGTCGGCCGC GTGGAGTGGG CGCTGCTGGG TGAGCACAAC
CAGCTCAATG CGCTCGCCGC CATCGCGGCG GCAGAACATG TCGGCGTCGC GCCGGCCGAC
GCAGCCCGCG CGCTGGCCGG CTTCGCGAAC GTGAAGCGCC GGCTCGAGCT GCGCGGCGAG
GTCCGCGGCA TCAAGGTCTA CGACGATTTC GCTCACCACC CGACGGCCAT GCGCACCACC
ATCGACGGCT TGCGGCGCCG GATCGGCGAG CAGCGCATCT TGGCCGTGTT CGAGCCGCGG
TCCAACACCA TGAAGCTCGG CGCGATGAAG GCCCAGCTGC CGTGGGCGCT GGAGGAGGCC
GACCTGGCCT TCTGCCACAG CGGCGGCCTG GGCTGGAACG CCGGCGAGGC GCTGGCGCCA
CTGGGCGACC GCGCGGTCGT CGGCGACTCG ATCGACGCGC TGGTCCAGCG CGTGGTCCAG
GCGGCGCGCA GCGGCGATCA CGTGCTGTGC ATGAGCAACG GCAGCTTTGG CGGCATCCAC
GACAAGCTGC TCGCCGCGCT CGCGCGATGA
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| Protein sequence | MHIHILGICG TFMGGLAALA REAGHRVTGC DANVYPPMSD QLRALGIELI EGWDVQQLAL
KPDLYVIGNV VSRGNALMEA ILDAGLPYTS GPQWLAEHVL QGRHVLAVAG THGKTTTTSM
LAWILENNER RPGFLVGGVP QNFEVSARLG EGQPFVIEAD EYDTAFFDKR SKFVHYRPRT
AVLNNLEFDH ADIFADLAAI ETQFHHLLRT VPASGRVIVN AREESLARVL ERGCWSDVQR
FGVRGDVPGF RARGEPHSFD VLKSGVQVGR VEWALLGEHN QLNALAAIAA AEHVGVAPAD
AARALAGFAN VKRRLELRGE VRGIKVYDDF AHHPTAMRTT IDGLRRRIGE QRILAVFEPR
SNTMKLGAMK AQLPWALEEA DLAFCHSGGL GWNAGEALAP LGDRAVVGDS IDALVQRVVQ
AARSGDHVLC MSNGSFGGIH DKLLAALAR
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