| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3171 |
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| Symbol | |
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| ID | 4786568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3372326 |
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| End bp | 3373285 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640091743 |
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| Product | RNA polymerase sigma-32 factor |
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| Protein accession | YP_001022359 |
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| Protein GI | 124268355 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.171654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.223351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCG ATGCCATGAA CACCACGCTG TCCCTGAACA CTTCCGCGGG CTCGCAGGCG
CTGACGGTGC GCGATCCGTG GGCGCTGGTC CCGTCGCTCG GCGACCTGAA TGCCTATATC
GCCGCCGTGA ACCGCCTGCC GATGCTGACG CTCGAGGAAG AGCAGTCGCT CGGCCAGCGG
CTGCGTGACG AACACGACCT CGAGGCTGCC GGTCGCTTGG TGCTGTCGCA CTTGCGTCTG
GTCGTGTCGG TATCGCGTCA GTACCTGGGC TACGGACTCC CTCACGGCGA CCTGATCCAG
GAAGGCAATG TCGGCCTGAT GAAGGCCGTC AAGCGCTTCG ACCCCAGCCA GGGCGTGCGA
CTGGTCAGCT ATGCGCTGCA CTGGATCAAG GCCGAAATTC ACGAGTACGT GCTGCGCAAC
TGGCGCATGG TCAAGCTGGC GACCACGAAG GCACAGCGCA AGCTGTTCTT CAACCTGCGC
TCGATGAAAC AGGGTTTCAA GGGCGATGCC ACCGACAGCG ACCTGCACCG CAGCACGCTG
ACCGATGCCG AGATCGACAT CGTGGCCAGT GAACTCAAGG TCAAGCGCGA GGAAGTGATC
GAGATGGAGA CGCGCCTGTC GGGTGGCGAT GTCGCGCTCG ATCCACAGAC CGACGACGGC
GACGAGAGCT ACGCGCCGAT CGCCTATCTG GCCGACGACC GCCACGAGCC GACGCGTGTG
CTCGACGCCC AGCGCCGTGA CGCGCTGGCC GGCGACGGCA TCGGCGAGGC GCTGGACGTG
CTGGACGCGC GCAGCCGACG CATCGTCGAG GAACGCTGGC TCAAGGTCAA CGACAACGGT
TCAGGCGGCA TGACGCTGCA TGAACTGGCC GCCGAGTACG GCGTCAGCGC CGAGCGGATC
CGCCAGATCG AGGTAGCCGC CATGAAGAAG ATGCGCAAGG CGCTGGCCGC CTACGCCTGA
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| Protein sequence | MSFDAMNTTL SLNTSAGSQA LTVRDPWALV PSLGDLNAYI AAVNRLPMLT LEEEQSLGQR
LRDEHDLEAA GRLVLSHLRL VVSVSRQYLG YGLPHGDLIQ EGNVGLMKAV KRFDPSQGVR
LVSYALHWIK AEIHEYVLRN WRMVKLATTK AQRKLFFNLR SMKQGFKGDA TDSDLHRSTL
TDAEIDIVAS ELKVKREEVI EMETRLSGGD VALDPQTDDG DESYAPIAYL ADDRHEPTRV
LDAQRRDALA GDGIGEALDV LDARSRRIVE ERWLKVNDNG SGGMTLHELA AEYGVSAERI
RQIEVAAMKK MRKALAAYA
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