| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3167 |
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| Symbol | |
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| ID | 4786564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3365410 |
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| End bp | 3368643 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640091739 |
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| Product | signal transduction histidine kinase-like protein |
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| Protein accession | YP_001022355 |
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| Protein GI | 124268351 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0540842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA CGCTCACTCA CTCCAGTCCG ACAGCCTCCG CCCCCCCCTT CGTCGCCACA
TCGCTGGTGA CCCTGGTGCT GGTCGCGCTG GCCTATGTGC TGACGGGCGC GGCCTCGCTG
CAACTCGCGA TCCCCCCCGG CTACGCTTCG CCGCTGTTCC CGCCGGCCGG CATCGCGCTG
GCCGCGGCCT TGGTCTACGG TTGGCGGGTG CTGCCGGCGG TGATGCTCGG GAGCCTGAGC
GTGCAGATGC TCGTGTACTT CAACGGCGAT CAGCAGCATG TCTTCCGCGA TTCGCTCACC
GGGCTCGCAA TCGCTTGCGG TGCGACGATG CAGACTGCGC TCGGCGCCTG GCTGGTGCGC
CGCGGCCTGA GGGAGCCACT GACGCTGGAC GGGCCGGCTT CGATCCTGCG CCTGTTCGGT
TTCGGTGCGT TGGCCGCCTG TACCGTCGGG GCAAGCCTGA GCGTCCTGGC GCTGTGGTTG
GCCGGTCTGC TGCCGACCGC CCTGCTATTC GACACCTGGT GGACCTGGTG GGGCGGCGAT
GCCTTGGGCG TGATGATCGC CACACCCGTG GTGCTGACGC TGATCGGCCG ACCGCGGACC
GCCTGGCGCC CGCGCCGCAA CACCGTGGCC TTGCCGTTGG TGGTTGCCAC CTTGCTGCTG
GCGCTGGCCA TCTGGCAAGT CGCCCGCTGG GACGGCCAGC GCGACGCGGC GCGCTTCGAG
CGCGATGCGA TCAGCGTGAG CCGTACAGTC GAGCTGCGGC TCAATGCCCA CCTCGACGCA
CTGGATGCGA TGCACAGCAT CTATGTCGCG TCGTCGAACG TCGACAGCCG TGAGTTCGAG
CGGGCCAGCG CCGGCTGGCT GCGCAAGCTG CCGAGCGTGC AGGCGATCGG TTGGCATGAG
CGCGTTGCGC GGCAGGACCT GCCGGCCTTC GAGGCAAGCC TGCGCTCTCT CGGTCAACCG
CACTACCGCG TGTTCGAACG CGACAGCGCC CTCAGCGCGA ACGACTCCGA ACTGATGGTG
ATGCGCTACA TCGAGCCGCG TGCTGGCAAC GACACCGCGC TGGGTGTCAA CGCGCTGTCG
ATTCGCGCTG CCCGCGAGGC CATCGCGCGC GCGCGCCTGA ACGATGGCGC CACGGTCACC
CCTGGCTTCA GGCTCACGCA GGAAACCGCA CAGCAGACCG GCGTTGTCGT CTATCGCGCC
GTGTACCGTG GGGACGAGCC ATCACGCAGC TTGCAGGGAA TGGTCTTCAT TACTCTACGC
ATGGAAGACG CTCTGGCCCG GCTTGCTGTC GGTGCCCCAC GCTACCTTCA GTTCTGTCTG
CTGGACAGTG ATGCCCCCCC CGAGAGCCGG CTGCTGGCCG GCTCGTCCGA CTGCGCGCGC
CCTGCCGTCA ATCCCCTATG GAGCCACACC GCGGAGATCC CGTTCGCCGG TCGCACCTGG
GAGCTTCGGG TGCAGGCACC GAATGGCGTT CCCAATGGGC CCGCCGCCGG GCCGCTATCG
GGAGAGAGCG CGACGGCTTG GCTGTTCTCA CTGACCGGGC TGCTCGGCAC CGGCATGATG
GGTGCGCTGC TTCTGCTCGT CACAGGGCGC ACTCGGCAGA CCGAAACGGC TGTCGCAGAA
CGTACCGAGC AGTTGGAGCA CGAGATCACC GAGCGCCTGG CCACCGAACA GGCGCTGCGC
GAGAGCGAGC AGCGCTTCCG CAGCATCTTC AACTCGGTGC CTATCGGCGT GGTCTACACC
GACCTTCAGG GCCGCATCAA GCAGCCTAAC GCAGCCTACT GCACCATGAC CGGCTACAGC
GAAGAAGAGC TGTTGAGCCT GTCGCTCGCC AGCCTGACCC ACCCCGAGGA CCGTGCCGCC
GATCTGGCAA GCCAGCAGGA TCTGGTGGAC GGGCGGCTGC CGCTGTACCG ACGGCGCAAA
CGCTACGTCA CCAGGAACGG CCCGGTACTG TGGGTCAGCG TGACGGTCAG CCTGCTGCGC
GACGAGCACG GCCAGCCGCA CCGGCTGGTG GGACTGGTCG AGGACATCAG CGAGCACCTG
CGCCTCGAAG AAGCGGAGCA TGCGCGCGAA TCCGCGGAGA CCGCCAACCG CGCGAAAAAC
GAGTTCCTTT CGCGCATGAG CCACGAACTG CGCACGCCGC TCAACGCGAT GCTCGGCTTC
GCGCAACTGC TCGACCTCGA CCGCGGCGAG CCTCTGCACG AGCGCCACCG GATGTGGGTA
ACGCAGATCC AACAGGCCGG CTGGCATCTG CTGGAGATGA TCAACGACGT GCTGGACCTG
TCGCGCATCG AGTCCGGCAC ACTGAGCCTG CAGGTCGAGT CGTTGTCGCT GGAGCCGCTG
ATCGCCGCAT CGATGGCACT GGTGGAGCCG CAGGCGCGCG GTCGCGGCCT CACGCTTGTC
CGCACGATGG CCGAGCACGC CCCGCTGCAG GTTTTGGGCG ACGCGACTCG CGTCAAGCAG
ATCCTCACCA ACCTGCTGAG CAACGCCGTC AAATACAACC GCGAGGCGGG TGAGGTGCGT
GTGTCGACCC GTCGCACTGA GGACCGCGAT GGCACGCCGA TGCTGGAACT CGACGTCTGC
GACACCGGCC TGGGCATCGA GCCTCAGCTG CTGACCCAGC TGTTCCAGCC CTTCAACCGG
CTGGGGCGCG AGCGTGGCGC GACCGAAGGC ACCGGCATCG GCCTAGTGAT CGCCAAGCTG
CTGGCCGAGC GCCAGGGCGG GTCGCTGAAG GTGCGAAGCG AGCCCGGTGT CGGCTCGACC
TTCACGCTGC GCCTGCCGCT GGACTCGCAA GCGCGGCCGA TGACCGCGAG CCAGGAGGCC
GACGAAGAGG CCAACGCAGC CTACAACCGT CGTCATGTGC TCTACATCGA GGACAACGAC
ACCAACGTCG AGGTGATGCG CGGCATCTTC GGCCTGCGTC CGCAGGTCCG TCTGGCCGTC
GCGACCACCG GGCTGGACGG CTTGGCGGCC GTGCGCACCT CGGCGCCCGA CCTGATCCTG
CTCGACATGC ACCTGCCCGA CATCGACGGC ATGGTGCTGC TCCAGCACCT GAAGTCCGAC
GAGCAGACCG CCGAGATCCC GGTCATCGCC GTCTCCGCCG ACGCGCTGCC GGCCCAGATC
TCGGCCGCCC TGGGGGCCGG CGCGATCCGC TACCTCACGA AGCCGGTCGC CATCGACGAG
GTGCTCGGCG TCCTGGACGA GCTGCTGTCG CAGCTGACGA CCCGCTTCGG CTAG
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| Protein sequence | MADTLTHSSP TASAPPFVAT SLVTLVLVAL AYVLTGAASL QLAIPPGYAS PLFPPAGIAL
AAALVYGWRV LPAVMLGSLS VQMLVYFNGD QQHVFRDSLT GLAIACGATM QTALGAWLVR
RGLREPLTLD GPASILRLFG FGALAACTVG ASLSVLALWL AGLLPTALLF DTWWTWWGGD
ALGVMIATPV VLTLIGRPRT AWRPRRNTVA LPLVVATLLL ALAIWQVARW DGQRDAARFE
RDAISVSRTV ELRLNAHLDA LDAMHSIYVA SSNVDSREFE RASAGWLRKL PSVQAIGWHE
RVARQDLPAF EASLRSLGQP HYRVFERDSA LSANDSELMV MRYIEPRAGN DTALGVNALS
IRAAREAIAR ARLNDGATVT PGFRLTQETA QQTGVVVYRA VYRGDEPSRS LQGMVFITLR
MEDALARLAV GAPRYLQFCL LDSDAPPESR LLAGSSDCAR PAVNPLWSHT AEIPFAGRTW
ELRVQAPNGV PNGPAAGPLS GESATAWLFS LTGLLGTGMM GALLLLVTGR TRQTETAVAE
RTEQLEHEIT ERLATEQALR ESEQRFRSIF NSVPIGVVYT DLQGRIKQPN AAYCTMTGYS
EEELLSLSLA SLTHPEDRAA DLASQQDLVD GRLPLYRRRK RYVTRNGPVL WVSVTVSLLR
DEHGQPHRLV GLVEDISEHL RLEEAEHARE SAETANRAKN EFLSRMSHEL RTPLNAMLGF
AQLLDLDRGE PLHERHRMWV TQIQQAGWHL LEMINDVLDL SRIESGTLSL QVESLSLEPL
IAASMALVEP QARGRGLTLV RTMAEHAPLQ VLGDATRVKQ ILTNLLSNAV KYNREAGEVR
VSTRRTEDRD GTPMLELDVC DTGLGIEPQL LTQLFQPFNR LGRERGATEG TGIGLVIAKL
LAERQGGSLK VRSEPGVGST FTLRLPLDSQ ARPMTASQEA DEEANAAYNR RHVLYIEDND
TNVEVMRGIF GLRPQVRLAV ATTGLDGLAA VRTSAPDLIL LDMHLPDIDG MVLLQHLKSD
EQTAEIPVIA VSADALPAQI SAALGAGAIR YLTKPVAIDE VLGVLDELLS QLTTRFG
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