Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3167 |
Symbol | |
ID | 4786564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 3365410 |
End bp | 3368643 |
Gene Length | 3234 bp |
Protein Length | 1077 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640091739 |
Product | signal transduction histidine kinase-like protein |
Protein accession | YP_001022355 |
Protein GI | 124268351 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0540842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATA CGCTCACTCA CTCCAGTCCG ACAGCCTCCG CCCCCCCCTT CGTCGCCACA TCGCTGGTGA CCCTGGTGCT GGTCGCGCTG GCCTATGTGC TGACGGGCGC GGCCTCGCTG CAACTCGCGA TCCCCCCCGG CTACGCTTCG CCGCTGTTCC CGCCGGCCGG CATCGCGCTG GCCGCGGCCT TGGTCTACGG TTGGCGGGTG CTGCCGGCGG TGATGCTCGG GAGCCTGAGC GTGCAGATGC TCGTGTACTT CAACGGCGAT CAGCAGCATG TCTTCCGCGA TTCGCTCACC GGGCTCGCAA TCGCTTGCGG TGCGACGATG CAGACTGCGC TCGGCGCCTG GCTGGTGCGC CGCGGCCTGA GGGAGCCACT GACGCTGGAC GGGCCGGCTT CGATCCTGCG CCTGTTCGGT TTCGGTGCGT TGGCCGCCTG TACCGTCGGG GCAAGCCTGA GCGTCCTGGC GCTGTGGTTG GCCGGTCTGC TGCCGACCGC CCTGCTATTC GACACCTGGT GGACCTGGTG GGGCGGCGAT GCCTTGGGCG TGATGATCGC CACACCCGTG GTGCTGACGC TGATCGGCCG ACCGCGGACC GCCTGGCGCC CGCGCCGCAA CACCGTGGCC TTGCCGTTGG TGGTTGCCAC CTTGCTGCTG GCGCTGGCCA TCTGGCAAGT CGCCCGCTGG GACGGCCAGC GCGACGCGGC GCGCTTCGAG CGCGATGCGA TCAGCGTGAG CCGTACAGTC GAGCTGCGGC TCAATGCCCA CCTCGACGCA CTGGATGCGA TGCACAGCAT CTATGTCGCG TCGTCGAACG TCGACAGCCG TGAGTTCGAG CGGGCCAGCG CCGGCTGGCT GCGCAAGCTG CCGAGCGTGC AGGCGATCGG TTGGCATGAG CGCGTTGCGC GGCAGGACCT GCCGGCCTTC GAGGCAAGCC TGCGCTCTCT CGGTCAACCG CACTACCGCG TGTTCGAACG CGACAGCGCC CTCAGCGCGA ACGACTCCGA ACTGATGGTG ATGCGCTACA TCGAGCCGCG TGCTGGCAAC GACACCGCGC TGGGTGTCAA CGCGCTGTCG ATTCGCGCTG CCCGCGAGGC CATCGCGCGC GCGCGCCTGA ACGATGGCGC CACGGTCACC CCTGGCTTCA GGCTCACGCA GGAAACCGCA CAGCAGACCG GCGTTGTCGT CTATCGCGCC GTGTACCGTG GGGACGAGCC ATCACGCAGC TTGCAGGGAA TGGTCTTCAT TACTCTACGC ATGGAAGACG CTCTGGCCCG GCTTGCTGTC GGTGCCCCAC GCTACCTTCA GTTCTGTCTG CTGGACAGTG ATGCCCCCCC CGAGAGCCGG CTGCTGGCCG GCTCGTCCGA CTGCGCGCGC CCTGCCGTCA ATCCCCTATG GAGCCACACC GCGGAGATCC CGTTCGCCGG TCGCACCTGG GAGCTTCGGG TGCAGGCACC GAATGGCGTT CCCAATGGGC CCGCCGCCGG GCCGCTATCG GGAGAGAGCG CGACGGCTTG GCTGTTCTCA CTGACCGGGC TGCTCGGCAC CGGCATGATG GGTGCGCTGC TTCTGCTCGT CACAGGGCGC ACTCGGCAGA CCGAAACGGC TGTCGCAGAA CGTACCGAGC AGTTGGAGCA CGAGATCACC GAGCGCCTGG CCACCGAACA GGCGCTGCGC GAGAGCGAGC AGCGCTTCCG CAGCATCTTC AACTCGGTGC CTATCGGCGT GGTCTACACC GACCTTCAGG GCCGCATCAA GCAGCCTAAC GCAGCCTACT GCACCATGAC CGGCTACAGC GAAGAAGAGC TGTTGAGCCT GTCGCTCGCC AGCCTGACCC ACCCCGAGGA CCGTGCCGCC GATCTGGCAA GCCAGCAGGA TCTGGTGGAC GGGCGGCTGC CGCTGTACCG ACGGCGCAAA CGCTACGTCA CCAGGAACGG CCCGGTACTG TGGGTCAGCG TGACGGTCAG CCTGCTGCGC GACGAGCACG GCCAGCCGCA CCGGCTGGTG GGACTGGTCG AGGACATCAG CGAGCACCTG CGCCTCGAAG AAGCGGAGCA TGCGCGCGAA TCCGCGGAGA CCGCCAACCG CGCGAAAAAC GAGTTCCTTT CGCGCATGAG CCACGAACTG CGCACGCCGC TCAACGCGAT GCTCGGCTTC GCGCAACTGC TCGACCTCGA CCGCGGCGAG CCTCTGCACG AGCGCCACCG GATGTGGGTA ACGCAGATCC AACAGGCCGG CTGGCATCTG CTGGAGATGA TCAACGACGT GCTGGACCTG TCGCGCATCG AGTCCGGCAC ACTGAGCCTG CAGGTCGAGT CGTTGTCGCT GGAGCCGCTG ATCGCCGCAT CGATGGCACT GGTGGAGCCG CAGGCGCGCG GTCGCGGCCT CACGCTTGTC CGCACGATGG CCGAGCACGC CCCGCTGCAG GTTTTGGGCG ACGCGACTCG CGTCAAGCAG ATCCTCACCA ACCTGCTGAG CAACGCCGTC AAATACAACC GCGAGGCGGG TGAGGTGCGT GTGTCGACCC GTCGCACTGA GGACCGCGAT GGCACGCCGA TGCTGGAACT CGACGTCTGC GACACCGGCC TGGGCATCGA GCCTCAGCTG CTGACCCAGC TGTTCCAGCC CTTCAACCGG CTGGGGCGCG AGCGTGGCGC GACCGAAGGC ACCGGCATCG GCCTAGTGAT CGCCAAGCTG CTGGCCGAGC GCCAGGGCGG GTCGCTGAAG GTGCGAAGCG AGCCCGGTGT CGGCTCGACC TTCACGCTGC GCCTGCCGCT GGACTCGCAA GCGCGGCCGA TGACCGCGAG CCAGGAGGCC GACGAAGAGG CCAACGCAGC CTACAACCGT CGTCATGTGC TCTACATCGA GGACAACGAC ACCAACGTCG AGGTGATGCG CGGCATCTTC GGCCTGCGTC CGCAGGTCCG TCTGGCCGTC GCGACCACCG GGCTGGACGG CTTGGCGGCC GTGCGCACCT CGGCGCCCGA CCTGATCCTG CTCGACATGC ACCTGCCCGA CATCGACGGC ATGGTGCTGC TCCAGCACCT GAAGTCCGAC GAGCAGACCG CCGAGATCCC GGTCATCGCC GTCTCCGCCG ACGCGCTGCC GGCCCAGATC TCGGCCGCCC TGGGGGCCGG CGCGATCCGC TACCTCACGA AGCCGGTCGC CATCGACGAG GTGCTCGGCG TCCTGGACGA GCTGCTGTCG CAGCTGACGA CCCGCTTCGG CTAG
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Protein sequence | MADTLTHSSP TASAPPFVAT SLVTLVLVAL AYVLTGAASL QLAIPPGYAS PLFPPAGIAL AAALVYGWRV LPAVMLGSLS VQMLVYFNGD QQHVFRDSLT GLAIACGATM QTALGAWLVR RGLREPLTLD GPASILRLFG FGALAACTVG ASLSVLALWL AGLLPTALLF DTWWTWWGGD ALGVMIATPV VLTLIGRPRT AWRPRRNTVA LPLVVATLLL ALAIWQVARW DGQRDAARFE RDAISVSRTV ELRLNAHLDA LDAMHSIYVA SSNVDSREFE RASAGWLRKL PSVQAIGWHE RVARQDLPAF EASLRSLGQP HYRVFERDSA LSANDSELMV MRYIEPRAGN DTALGVNALS IRAAREAIAR ARLNDGATVT PGFRLTQETA QQTGVVVYRA VYRGDEPSRS LQGMVFITLR MEDALARLAV GAPRYLQFCL LDSDAPPESR LLAGSSDCAR PAVNPLWSHT AEIPFAGRTW ELRVQAPNGV PNGPAAGPLS GESATAWLFS LTGLLGTGMM GALLLLVTGR TRQTETAVAE RTEQLEHEIT ERLATEQALR ESEQRFRSIF NSVPIGVVYT DLQGRIKQPN AAYCTMTGYS EEELLSLSLA SLTHPEDRAA DLASQQDLVD GRLPLYRRRK RYVTRNGPVL WVSVTVSLLR DEHGQPHRLV GLVEDISEHL RLEEAEHARE SAETANRAKN EFLSRMSHEL RTPLNAMLGF AQLLDLDRGE PLHERHRMWV TQIQQAGWHL LEMINDVLDL SRIESGTLSL QVESLSLEPL IAASMALVEP QARGRGLTLV RTMAEHAPLQ VLGDATRVKQ ILTNLLSNAV KYNREAGEVR VSTRRTEDRD GTPMLELDVC DTGLGIEPQL LTQLFQPFNR LGRERGATEG TGIGLVIAKL LAERQGGSLK VRSEPGVGST FTLRLPLDSQ ARPMTASQEA DEEANAAYNR RHVLYIEDND TNVEVMRGIF GLRPQVRLAV ATTGLDGLAA VRTSAPDLIL LDMHLPDIDG MVLLQHLKSD EQTAEIPVIA VSADALPAQI SAALGAGAIR YLTKPVAIDE VLGVLDELLS QLTTRFG
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