Gene Mpe_A3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3165 
Symbol 
ID4786620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3363712 
End bp3364068 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content64% 
IMG OID640091737 
Productputative HNS-like transcription regulator protein 
Protein accessionYP_001022353 
Protein GI124268349 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00480481 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATACCA ACACGAAGGA CATCGGAATG GCGAAATCAC TGGCCCAGAT CCAAAAAGAA 
ATCGCGACGC TGCAGCGTCA GGCGGAAGCT CTCAAGAAGC GCGAAGTGAA AGACGTGATC
GAGCGCATCC GCGAGGCGAT AGCGTTCTAT GACCTGAGCG CGGCCGATCT CGGGCTCGCC
GCGTCGGGCC GCAAACCGCG CGGCACCGGG GCGAAAAAGA AGAAGCCGGC TCGGACCGCC
AGCAAAGTGA AGTACCGCGA CGACGCCGGC CACAGCTGGT CGGGCCACGG GCGGCGCCCG
CAGTGGTTCC TGGATGCGAT CGCTGGCGGC AAGACGCCGG AAGACCTCGC TGCTTGA
 
Protein sequence
MDTNTKDIGM AKSLAQIQKE IATLQRQAEA LKKREVKDVI ERIREAIAFY DLSAADLGLA 
ASGRKPRGTG AKKKKPARTA SKVKYRDDAG HSWSGHGRRP QWFLDAIAGG KTPEDLAA