| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3154 |
|---|
| Symbol | |
|---|
| ID | 4786609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3353527 |
|---|
| End bp | 3353979 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640091726 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001022342 |
|---|
| Protein GI | 124268338 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00965778 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGAA TGCGCAAGCA ACCTCCCATC CGCACACTCG TTGGCGAGGG CACGGTGATC
GAGGGCGAGA TCCGCTTCAG CGAGGGTCTC CGCATCGACG GGCGGGTGAT GGGCAATGTG
CTGGCCCTCG GCGACGAACG CAACCTGCTC GTGATCGGCG AGAAAGCCAG CATTGCCGGC
AGGGTCAAGG CGGGTCACGT GATCGTCAAT GGCGAAGTCC GCGGCCCGCT GGAATCGGAT
GAACTGCTGG AGTTGCAGCC CAAGGCTCGC ATAGAGGGCA ATGTGCGCTA CGAGCGCCTG
GAAATGCACC AGGGCGCACA GGTGAACGGG GAACTGCGGC CGCTGGCGTC GGAGGACAAA
CCTGCGCTGC GACTGGCGGC CAATGCGGTC TTGAGCGCAG TCGGTCACAA TACGAGGGCG
ATCCCGGATC GCGAGTCACA GGAGTCTCCA TGA
|
|---|
| Protein sequence | MFGMRKQPPI RTLVGEGTVI EGEIRFSEGL RIDGRVMGNV LALGDERNLL VIGEKASIAG
RVKAGHVIVN GEVRGPLESD ELLELQPKAR IEGNVRYERL EMHQGAQVNG ELRPLASEDK
PALRLAANAV LSAVGHNTRA IPDRESQESP
|
|---|
| |