| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3138 |
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| Symbol | gspF |
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| ID | 4786592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3338734 |
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| End bp | 3339948 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640091709 |
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| Product | general secretory pathway protein F |
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| Protein accession | YP_001022326 |
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| Protein GI | 124268322 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000899303 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGCTT ACAAATTCGA AGCCCTCGAC GCTGCCGGCA AGCCCAAGAG CGGCCTGCTG
GAGGCCGACA ACGCCCGCGC GGCGCGGGCC CAGCTGCGGC TGCAACAGCT GGTGCCGCTG
GAAGTGAAGC CGGTTCTGGG ACAGGCGGCG AACAGGGGCA GCTTCCAGCT CGGCCGGCGA
GTCTTCAACA GCACCGGATT GGCGATCTGG ACGCGCCAGC TGGCCGGCCT GGTGAGCGCC
GGCCTGCCGC TCGAACGCGC GCTGACCGCA CTGACCGACG AGGCCGAGGA CCCACGCCAG
CGCGAACTGC TGGCCCACCT GCGTGCCGAG GTCAACGCCG GCTCACCGTT CGCCCGTGCG
CTCGGCAATG CGCCGCGCGA GTTCGACGAC GTCTACCGGG CAGTCGTCGG CGCCGGCGAA
CAGACCGGCC AACTGGGCCT GGTGCTCGAG AAGCTCGCCG ACGACCTGGA AGAGCGCCAG
GAACTGCGCA GCAAGTTGAT CGGCGCAGCG CTCTATCCCG CCATCGTGTC CCTGGTAGCG
ATCGTGATCG TGGTCTTCCT GGTCACCTAC GTCGTGCCGC AGGTGGCCAG CGTGTTCGCG
GGCGGCAAGC GCGCCCTGCC CTTCCTCACC AGCGCCATGC TGGCGATCAG CGCCTTCCTG
CGCAGCTGGG GCTGGCTGCT CATGCTCGGC CTGGCCGGCG GCGTGGGCAC GCTGCTGTTC
ATGCGTCGCA ACGAGGTCTT CCGCGAGCGC TTCGACGCCT TCTGGCTCAC GCTGCCGCTG
ATCGGGCGCC TGTCCCGCGG CTACAACGCC GCACGCTTCG CCGGCACGCT GGCGATGCTG
GCCGGCGCCG GGGTACCGAT CCTGAAGGCC CTGCAGGCGG CCGCCGAAAC CCTGAGCAAC
CGCGCCATGC GGGCCGACGC GATGGCCGCG CTGATCCAGG TGCGCGAGGG TGCGCCGCTG
GCCTCGGCCC TGGCCGGCAA GCGACGCTTT CCCGGCCTGC TGGCGATGTT TGCCCGCCTG
GGCGAGCAGA CCGGCCAGCT GCCCGTGATG CTGCAGCGGG CCGCTGCGCA GCTCGGCACC
GAAGTGCAGC GCCGTGCGCT GGCGCTGGCC ACCATCCTCG AACCCCTGCT GATCGTGGTG
ATGGGCGCCG TGGTGATGCT GATCGTGCTG GCCGTTCTGC TGCCGATCAT CCAGCTCAAC
ACCTGGGTCA AATGA
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| Protein sequence | MPAYKFEALD AAGKPKSGLL EADNARAARA QLRLQQLVPL EVKPVLGQAA NRGSFQLGRR
VFNSTGLAIW TRQLAGLVSA GLPLERALTA LTDEAEDPRQ RELLAHLRAE VNAGSPFARA
LGNAPREFDD VYRAVVGAGE QTGQLGLVLE KLADDLEERQ ELRSKLIGAA LYPAIVSLVA
IVIVVFLVTY VVPQVASVFA GGKRALPFLT SAMLAISAFL RSWGWLLMLG LAGGVGTLLF
MRRNEVFRER FDAFWLTLPL IGRLSRGYNA ARFAGTLAML AGAGVPILKA LQAAAETLSN
RAMRADAMAA LIQVREGAPL ASALAGKRRF PGLLAMFARL GEQTGQLPVM LQRAAAQLGT
EVQRRALALA TILEPLLIVV MGAVVMLIVL AVLLPIIQLN TWVK
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