| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3131 |
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| Symbol | gspJ |
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| ID | 4786644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3330515 |
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| End bp | 3331162 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640091702 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001022319 |
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| Protein GI | 124268315 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.702697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.037121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCAGTC TCTCCCGTCA CGCCGCACAG GCCGGCTTCA CGCTGGTCGA GGTGCTGGTG
GCGCTGCTGA TCATGGCCAT CGTTGCCGCC TTGTCCTGGC AGGGCATCGA TGCCATCGTC
CGCTCGCGCG ACATCAGCAG CCAGCGGCTC GAGCAACAAC TTCGACTGCA GTCGGTGATC
GCGCAATGGG AGGCCGATCT CGCCGAAATA CAGGACAGTG GCATCGTCCC GGCGCTGCAG
TTCGACGGCG CGAGTCTGAG ACTGACGCGG CGCCAGGCCG CCGGCCTGCA ACTCGTCGTC
TGGTCGTTGC GCGGGGACAG CTGGACGCGA TGGGCCGGCC CGGCGGTGAC GCGGGGCGCG
GACTTGCGCG AAGCCTGGCT GCAGTCGCAG CAACTGCTCG GCAATGAAGC CGAACAGTTG
CGCGCATTGA GCGGCATCGC CAACTGGCAG CTCTATTACT GGCGTGGCAA CGCCTGGACC
AACGCCCAAT CGAGCGGGGA CGCCGCGCCG GCGACTGCTG CAACGCCGAC GCTGGCGACA
CGACAGGCGC TGCCGGGTGG CGTGCGCCTG GTCCTTGCCT TCACCGAGGG CAGCGGCCGG
GTCGGTGCCC TGACCCGCGA CCTGCGCCTG TCCCCGCAGG GCTCATGA
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| Protein sequence | MRSLSRHAAQ AGFTLVEVLV ALLIMAIVAA LSWQGIDAIV RSRDISSQRL EQQLRLQSVI
AQWEADLAEI QDSGIVPALQ FDGASLRLTR RQAAGLQLVV WSLRGDSWTR WAGPAVTRGA
DLREAWLQSQ QLLGNEAEQL RALSGIANWQ LYYWRGNAWT NAQSSGDAAP ATAATPTLAT
RQALPGGVRL VLAFTEGSGR VGALTRDLRL SPQGS
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