| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3130 |
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| Symbol | gspI |
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| ID | 4786643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3330117 |
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| End bp | 3330512 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640091701 |
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| Product | general secretion pathway protein I |
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| Protein accession | YP_001022318 |
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| Protein GI | 124268314 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.922976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.035398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCGCG CTGAGTTCCG GGCGCACTGC TCCGCCAGCC GCAACGTTCG CGGCATGACC
TTGATCGAGG TACTGGTAGC GCTGGCCATT GTGGCGGTCA CGCTGGGGGC TGGGCTCAAG
GCCGCCGGGG CGTTGACCGA CAACGCTCAG CGCCTCACCG ACGTGACGGT GGCCGAGTGG
TGCGCGGACA ACCAGCTCAC CGCCTTCAAG CTCATGCGGC AGTTTCCCGG TATCGGCGAC
AGCGAGTTCT ATTGCGAGCA GCTCGGTGTG GTCTATCAAG GCAAGATGGT GATCCGCCCG
ACCCCGAACC CCAATTTCCG ACGCGCCGAT GCGGTGGTCT TCACCCCCAG CGGCCAGACC
ATTCTGACGC TGTCGACGGT GCTGTCGAGG TACTGA
|
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| Protein sequence | MSRAEFRAHC SASRNVRGMT LIEVLVALAI VAVTLGAGLK AAGALTDNAQ RLTDVTVAEW
CADNQLTAFK LMRQFPGIGD SEFYCEQLGV VYQGKMVIRP TPNPNFRRAD AVVFTPSGQT
ILTLSTVLSR Y
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