| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3129 |
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| Symbol | gspH |
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| ID | 4786642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3329627 |
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| End bp | 3330130 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640091700 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001022317 |
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| Protein GI | 124268313 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0375089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGGC TCACGGCCAG CGGCCGAACG GGCCTGCGCC ACGCGACGGA CCGGTCGCGC
GGCTTCACGC TGATCGAACT GCTCATCGTC GTGAGCCTGA TTGCAATCGT TTCGGCCGTT
GCCTCGCTGG CGCTGCGCGA CCCGGCAGCC ACCCAGCTCG AGCGCGAGGC CGCCCGGCTG
GGCGCATTGC TCGAAGCAGC GCGTGCCGAG GCCCGAGCCG CCGGCGTGGC GGCGTTGTGG
GTGCCCTCCG AGACCGGTTT CCGTTTCGTC GGGCTGCCCA GCGAACTGGC CCTGCCGAGC
CGCTGGCTCG CGCCGGCCGG CATCAGCGCA GAGGTGCGGA ACGGCCGAGG CCGGATGCAG
GCGGCGGTGC TGGGGCCCGA GCCGGTGATC GGGGCCCAGC GCATCGTGCT GCGCCTCGAA
GCCCAGACCG TGGCGCTCGC GACCGACGGC TTCGGGCCGT TCGCTGTCGT CGACGACGAG
GCCTCCCCAA ATGTCGCGCG CTGA
|
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| Protein sequence | MSGLTASGRT GLRHATDRSR GFTLIELLIV VSLIAIVSAV ASLALRDPAA TQLEREAARL
GALLEAARAE ARAAGVAALW VPSETGFRFV GLPSELALPS RWLAPAGISA EVRNGRGRMQ
AAVLGPEPVI GAQRIVLRLE AQTVALATDG FGPFAVVDDE ASPNVAR
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