| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3116 |
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| Symbol | |
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| ID | 4786629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3316887 |
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| End bp | 3318161 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640091687 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001022304 |
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| Protein GI | 124268300 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0675356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC CCGGCGCCCC ATTCGTCGCC TACCGCGGCA CGGAGTTGTT CATCGACGGT
TGCGCGGCAA GCGAGCTCGC GGCACGCTTC GGCACCCCGC TTTACGTCTA CAGCCGCCGC
GCCATGCTCG CCGCGCTGGC GCCGTACCAG CGGGCGCTGG CCGGGCGGGA GCACCTGATC
TGCTACGCGA TGAAGGCAAG TTCGAGCCTG GCGGTGTTGC AGACCTTCGC CCAGGCCGGA
TGCGGCTTCG ACATCGTCTC GGGTGGCGAA CTAGATCGCG TACTGGCGGC CGGCGGTGAC
CCGGGCAAGG TGGTGTTTTC AGGGCTCGGC AAGACGCGTG CAGAGATGCG GCGTGCGCTC
GAGATCGGCG TGCGCTGCTT CAACGTCGAA AGCGAGGCGG AGTTGGACGT GCTGTCCGAG
GTGGCGTTGT CGCTCGGCCG GGTCGCCCCG GTCAGCCTGC GCGTCAACCC CGACGTCGAC
GCGAAGACCC ACCCCTACAT CTCCACCGGA CTGAAGGGCA ACAAGTTCGG CATCGCGCAC
GACCGGGCCG TCGCGGCCTA CCGTCGCGCG GCGCAGCTCC CCGGGCTCAA AGTGGTGGGG
ATCGACTGCC ACATCGGCTC TCAGATCACC GAGATCGCGC CCTATCTCGA TGCCGCCGAC
CGCGTTCTGG ACCTGGTCGA GGCGATCGAA TCGAGCGGCC TGCGGATCCA CCACCTCGAC
CTCGGCGGCG GCCTGGGCAT CCAGTACACC GATGAACGAC CGCCAGCCGC CGACGCCCTG
ATCGGCGCAC TGCTGGCGCG CCTCGACGCC CGGGGGCACG GTGCGCGCAC GCTGGTATTC
GAGCCGGGTC GCTCGCTGGT CGGCAATGCA GGTGTGCTGC TGTCCGAGGT GCTGTACCTG
AAGCCCGGTA CGCACAAGAA CTTCTGCGTC GTCGATGCCG CCATGAACGA CCTGATGCGT
CCTGCCCTGT ACGAAGCGAC GATGAGCATC GTGCCCTGCC GACTGCGGGA CGGCGTGCCT
GTCGTCTACG ACGTGGTCGG CCCGGTGTGC GAATCGGGTG ACTGGCTGGG CCGCGACCGT
GCGCTGGCAC TGCAGCCGGG CGATGCCGTC GCGGTCCTCA GCGCCGGAGC CTATGGCATG
AGCATGGCCA GCAACTACAA CAGCCGCCCG AGGGCCGCCG AGGTGATGGT CGATGGCGAC
GTGGCCACGC TGATCCGTGA ACGCGAACCC GTCGCGGAGC TGTTCCGCGG AGAACATTTG
CTGCCCGCTG ACTGA
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| Protein sequence | MTLPGAPFVA YRGTELFIDG CAASELAARF GTPLYVYSRR AMLAALAPYQ RALAGREHLI
CYAMKASSSL AVLQTFAQAG CGFDIVSGGE LDRVLAAGGD PGKVVFSGLG KTRAEMRRAL
EIGVRCFNVE SEAELDVLSE VALSLGRVAP VSLRVNPDVD AKTHPYISTG LKGNKFGIAH
DRAVAAYRRA AQLPGLKVVG IDCHIGSQIT EIAPYLDAAD RVLDLVEAIE SSGLRIHHLD
LGGGLGIQYT DERPPAADAL IGALLARLDA RGHGARTLVF EPGRSLVGNA GVLLSEVLYL
KPGTHKNFCV VDAAMNDLMR PALYEATMSI VPCRLRDGVP VVYDVVGPVC ESGDWLGRDR
ALALQPGDAV AVLSAGAYGM SMASNYNSRP RAAEVMVDGD VATLIREREP VAELFRGEHL
LPAD
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