| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3112 |
|---|
| Symbol | pilP |
|---|
| ID | 4786625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3311949 |
|---|
| End bp | 3312593 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640091683 |
|---|
| Product | fimbrial assembly protein |
|---|
| Protein accession | YP_001022300 |
|---|
| Protein GI | 124268296 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3166] Tfp pilus assembly protein PilN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.230305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTGA TCAACCTCCT GCCGCATCGC GAAGAGCGGC GGCAGCGTCG CAAGAAGGCC
TTCTTCGTCG GGCTGGGTGT TGCGGCTGCA GCCGGTATCG CCATTGCGGC GCTCTGGTAC
CTGGTGCTGC AACAGATGAT CAGCACCCAG CAAGAGCGCA ATGCCTACCT GACAGCCGAG
ATCAAGAAGC TCGAGGAGCA GATCAAGGAC ATCGCGACGC TCAAGGCCGA GATCGACAGC
CTGAAGGCGC GTCAGAAGGC CGTCGAAGAT CTGCAGACGG ATCGCAACAT CCCTGTGTAC
CTTCTGAACG AACTCGTCAA GCAGACGCCC GAAGGCGTGT ACCTGACCAC GATCAAGCAG
GATGGTCAGG TGGTGGCAAT CAACGGCATT GCGCAGACGA ACGAACGCGT CTCCGAGTTT
CTGCGCAACA CTGCCTACAA CTCGACTTGG CTCGAGAAGC CGGAGTTGGT GGAGATCAAG
GCGGCCAGCC TGACGACGCC CAACCGCGAG CAGAAGCGAT TGTTTGATTT CGTGGTGAAG
GTCGGTCTCA AGCGTCCTCA AGTGGAGACG CCGGACAAAT CGGCGGTCCC CGGCGCTGCG
GGGGCCTCGG TTCCAGCGGC GGCCGCGTCG GTGCCCCGTT CCTGA
|
|---|
| Protein sequence | MILINLLPHR EERRQRRKKA FFVGLGVAAA AGIAIAALWY LVLQQMISTQ QERNAYLTAE
IKKLEEQIKD IATLKAEIDS LKARQKAVED LQTDRNIPVY LLNELVKQTP EGVYLTTIKQ
DGQVVAINGI AQTNERVSEF LRNTAYNSTW LEKPELVEIK AASLTTPNRE QKRLFDFVVK
VGLKRPQVET PDKSAVPGAA GASVPAAAAS VPRS
|
|---|
| |