| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3102 |
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| Symbol | gltD |
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| ID | 4786675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3297001 |
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| End bp | 3298467 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640091673 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001022290 |
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| Protein GI | 124268286 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.541547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAG TCACCGGATT TCTGGAATAC GAGCGTCTCG AGGAAGGCTA CGCGCCGGTC
GAGCAGCGGC TCAAGCACTA CAAGGAATTC GTCATCGGGC TGAAGGACGA GGAAGCCAAG
GTCCAGAGCG CACGCTGTAT GGACTGCGGC ACGCCGTTCT GCAACAGCGG CTGTCCGGTC
AACAACATCA TTCCCGACTT CAACGACCTC GTGTACCGAG GGGACTGGGC GAACGCGATC
GCGGTGCTGC ACAGCACGAA CAACTTCCCC GAGTTCACCG GTCGCATCTG CCCGGCGCCG
TGCGAGGCCG CCTGCACGCT CAATGTCAAC GACGACGCGG TCGGCATCAA GAGCATCGAA
CACGCCATCA TCGATCGCGC ATGGGCCGAG GGTTGGGTGC AGGCACAGCC TGCGCGCCAC
AAGACCGGCA AGACGGTGGC GGTCGTCGGC TCGGGGCCGG CCGGCATGGC GGCGGCACAG
CAGCTCGCAC GGGCCGGCCA CGCCGTCACG CTGTTCGAGA AGAACGACCG CATCGGCGGC
CTGCTGCGCT ACGGCATCCC CGACTTCAAG ATGGAGAAGA CGCACATCGA TCGGCGCGTC
GAGCAGATGA AGGCCGAAGG GGTGGTGTTC CGAACCGGGG TGCTGGTCGG TCACCTGCCG
GAAGGCTCGA AGGTCACGAA CTGGGCCAAG GAGATCGTGT CGCCCGAGCA GCTGAAGGCC
GAGTTCGATG CCGTCGTGCT GACCGGGGGT GCCGAACAGA GTCGCGACCT GCCGGTGCCG
GGGCGTGATC TCGACGGCGT GCACTTCGCG ATGGAGTTCC TGCCGCAGCA GAACAAGATC
AATGCCGGCG ACAAGCTCAA GGGCCAGATC CGCGCCGACG GCAAGCATGT CATCGTGATC
GGCGGTGGCG ACACGGGCAG CGACTGCGTC GGCACCAGCA ACCGCCACGG CGCGAAGAGC
GTGACGCAGT TCGAGCTGAT GCCCATGCCG CCGGAGCAGG AGAACAAGGA GCTCACCTGG
CCCTACTGGC CGTACAAGCT GCGCACCAGC TCCAGCCATG ACGAGGGTTG CGAGCGCGAG
TTCGCGATCG CCACCAAGGA GTTCATCGGC GACAAGGGCA AGGTCACGGC GCTGAAGACC
GTGCGCGTCG AGTGGCAGGG CGGCAAGATG GTCGAGGTGC CGGGCAGTGA GCAGGTGCTC
AAGGCCGATC TGGTGCTGCT GGCGATGGGC TTCGTCAGCC CCGTGTCGAC CGTGCTCGAC
GCCTTCGGCA TCGACAAGGA CAGCCGCGGC AACGCCAAGG CGACGACCGA CTTCACCGGG
GGCTACCAGA CCAATGTGCC CAAGGTGTTC GCTGCCGGAG ACGTCCGCCG TGGTCAGTCG
CTCGTGGTGT GGGCGATCCG CGAAGGGCGC CAGGCCGCCC GCGCCGTGGA CGAGTTCCTG
ATGGGATACA GCGACCTGCC CCGCTAG
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| Protein sequence | MGKVTGFLEY ERLEEGYAPV EQRLKHYKEF VIGLKDEEAK VQSARCMDCG TPFCNSGCPV
NNIIPDFNDL VYRGDWANAI AVLHSTNNFP EFTGRICPAP CEAACTLNVN DDAVGIKSIE
HAIIDRAWAE GWVQAQPARH KTGKTVAVVG SGPAGMAAAQ QLARAGHAVT LFEKNDRIGG
LLRYGIPDFK MEKTHIDRRV EQMKAEGVVF RTGVLVGHLP EGSKVTNWAK EIVSPEQLKA
EFDAVVLTGG AEQSRDLPVP GRDLDGVHFA MEFLPQQNKI NAGDKLKGQI RADGKHVIVI
GGGDTGSDCV GTSNRHGAKS VTQFELMPMP PEQENKELTW PYWPYKLRTS SSHDEGCERE
FAIATKEFIG DKGKVTALKT VRVEWQGGKM VEVPGSEQVL KADLVLLAMG FVSPVSTVLD
AFGIDKDSRG NAKATTDFTG GYQTNVPKVF AAGDVRRGQS LVVWAIREGR QAARAVDEFL
MGYSDLPR
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