Gene Mpe_A3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3098 
Symbol 
ID4786671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3293958 
End bp3294746 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID640091669 
Productputative lipoprotein 
Protein accessionYP_001022286 
Protein GI124268282 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.633351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.297241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCGG GTGTCTGTCG ATCGGCGATC CTGGCGGTGG CCCTGGCGCT CGGCCTCGTC 
GGCTGCGCCA CCGTCGAGCA GCCCGACCCG CTGGAGAAGC TCAACCGCAA GACCTTCGCG
TTCAACGAGA CGGTGGACCA GTACCTGATC GCGCCGCCGG CGCGCGTCTA TCGCGAAGTT
GTGCCCTCGG TCGCTCGCCA GGGCATCGAC AACTTCTTCA ACAACCTGCG CGATGTCTGG
TCGGCCTTCA ATCTGATCCT CCAGGGCCGC TTCGGCGACA GTGCGAACGA CGTGATGCGT
TTCGGCACGA ACACCGTGTT CGGCCTCGTC GGCTTCGTCG ACTGGGCCTC CGCGCTGGGC
CTCGCGCCGC ACTACGAGGA TTTCGGCCAG ACGCTGGGCG TCTGGGGCTT CGATGCCGGT
GCCTACCTGG TGCTCCCGGT GCTGGGGCCG TCTTCGGCGC GCGATGCGGT CGGTCTGCCG
GTCGACCTGC TGGCCTCGCC GGACCAGGTG GTCGAATCGG TCCGGTTGCG CAATGCGCTG
ACCGGCCTGC GCGTGATCAA CACGCGCGCG GGGCTGCTCG ACGCCACCGG GCTGCTCGAC
GACATCGCGC TCGACAAGTA CAGCTTCGTG CGCGACGCCT ACCTGCAGCG CCGCCGCAGC
CTGGTGGAGG ACGGCCGGCG TCGCGATGCA GGAGCGGTCG AAGAGGATTA CGTTCCCGAC
GAACCGGCTA CTCCTGCCTC TGCGCCGGCG GAGCCCGCCA GTGCGCCAGT GCCACAGGCC
CGACCCTGA
 
Protein sequence
MKSGVCRSAI LAVALALGLV GCATVEQPDP LEKLNRKTFA FNETVDQYLI APPARVYREV 
VPSVARQGID NFFNNLRDVW SAFNLILQGR FGDSANDVMR FGTNTVFGLV GFVDWASALG
LAPHYEDFGQ TLGVWGFDAG AYLVLPVLGP SSARDAVGLP VDLLASPDQV VESVRLRNAL
TGLRVINTRA GLLDATGLLD DIALDKYSFV RDAYLQRRRS LVEDGRRRDA GAVEEDYVPD
EPATPASAPA EPASAPVPQA RP