| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3058 |
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| Symbol | |
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| ID | 4784920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3252271 |
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| End bp | 3254112 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640091629 |
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| Product | general secretory pathway related protein |
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| Protein accession | YP_001022246 |
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| Protein GI | 124268242 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.438801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTC GCACTCCCGC TGCCGCGCGC GCGCCGGCCT CCGCTGACAC GGCGCTTCCC
GCGGCCGACG CGGCGCCGCA AGGGCCGCTG CACTGGCGCC AGCTCGTCAC CTGGCTGCTG
ACCGACGGCG TGATCACGCT GGCCGACGGC AAGCGCGTGG CGCAGCGCTT CGCCGCCGGC
GACAGCGCGC AGCACCCGCT GGTGCGGCTG AGCGGCGCCG GGTTGGTGCA TGCGACCACC
GGCGCGGCGC TCGACGTCGA ATCGCTGACC GAGTGGCTGG CCAAGCGTTG CCAGCTGCCT
TATGTGCGCA TCGACCCGCT GAAGGTCGAT GTGGCGCGCG TGGCCGACGT GATGTCGGCC
ACCTACGCCG AGCGCCGCCG CGCGCTGCCG CTGCAGGTCG GCCCGACCGA GGCGCTGGTG
GCGACCTGCG AGCCTTTCGA CACCGACTGG CTGCCGCAGA TCGAGGCCCA CACACGCAAG
ACCATCAAGC TCGCGCTCGC CAGCCCACTG GAGATCCAGC GCTACACGAC CGAGTTCTAC
ACGCTGTCGC GCTCGGTGCG TGCGGCGCAG AAGAGCGGCG ATGGCGCCGG GCCGGCCAGC
TTCGAGCAAC TCGTCGAGCT GGGCAAGAGC AACAAGCAGC TCGACGCCAA CGACCAGGGC
GTGGTGCAGG TGGTCGACTG GCTGTGGCAG TACGCCTTCG ACCAGCGCGC CTCCGACATC
CACCTCGAGC CGCGCCGCGA GATGGGGGCG ATCCGCTTCC GCATCGACGG CGTGCTGCAC
ACCGTCTACC AGGTGCCGCT GTCGGTGATG GGCGCGATGA CGAGCCGCAT CAAGCTGCTC
GGCCGCATGG ACGTGGTCGA GAAGCGACGC CCTCTCGACG GTCGCATCAA GACGCGCCGG
CCCGGCCCCG AGGGCACGTC GCGCGATGTG GAAATGCGGC TGTCCACGCT GCCCACGGCG
TTCGGCGAGA AGATGGTGAT GCGCATCTTC GACCCCGATG CGGCGGTCAA GCCGTTGTCG
GGACTGGGTT TCGCGCCGCA CGAGGTGCGA CTGTGGGAGG AACTCGTCAC GCGCTCGCAC
GGCATCATCC TCGTGACCGG CCCCACTGGT TCGGGCAAGA CCACCACGCT CTACTCCACG
CTCAAGCGCC TGGCGACCGA CGAGGTCAAT GTCTGCACCA TCGAGGACCC GATCGAGATG
ATCGAGCCGG CCTTCAACCA GACCCAGGTC CAGCCGGTGC TCGACCTCGG CTTCGCCGAG
GGCCTGCGCG CGCTGATGCG GCAGGACCCG GACATCATCA TGGTCGGCGA GATCCGCGAC
CTCGAGACCG CCGAGATGGC GATCCAGGCC GCGCTCACGG GGCACCTGGT GTTCAGCACG
CTGCACACCA ACGACGCCGC GGCGGCCGTC ACGCGGCTCA CCGACCTCGG CGTGCCGCCC
TACCTGATCG GCGCGACGGT GATCGGCGTG CTGGCGCAGC GCCTGGTGCG CACGCTCTGT
CCGTCGTGCA AGCAGCCCGA CGACAGTGCC GCCGGCCGCG AGGTGCTCGA CGAGGCCATC
CGGCCCTGGA AGCTCAACGG CGAGTACCGG CCCTGCAAGC CCGTCGGCTG TCTCGAATGC
CGCCACACCG GCTACCGCGG CCGGGCCGGC CTGTACGAAC TGCTGGAGCT GAACGACGCA
CTGCAGTCGA GCATCCATCC TCACTACGAC GCCGGAGCCC TGCGCAGGCA GGCGGTGAAG
CAGGGCCTGC AGCCGCTGCG ACTGGCCGGT GCGATGAAGG TCGCGCAGGG CCTGACCACG
ATCGACGAGG TGCTGCGCGC CACGCCGCGC TGGGAGGCCT AG
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| Protein sequence | MTARTPAAAR APASADTALP AADAAPQGPL HWRQLVTWLL TDGVITLADG KRVAQRFAAG
DSAQHPLVRL SGAGLVHATT GAALDVESLT EWLAKRCQLP YVRIDPLKVD VARVADVMSA
TYAERRRALP LQVGPTEALV ATCEPFDTDW LPQIEAHTRK TIKLALASPL EIQRYTTEFY
TLSRSVRAAQ KSGDGAGPAS FEQLVELGKS NKQLDANDQG VVQVVDWLWQ YAFDQRASDI
HLEPRREMGA IRFRIDGVLH TVYQVPLSVM GAMTSRIKLL GRMDVVEKRR PLDGRIKTRR
PGPEGTSRDV EMRLSTLPTA FGEKMVMRIF DPDAAVKPLS GLGFAPHEVR LWEELVTRSH
GIILVTGPTG SGKTTTLYST LKRLATDEVN VCTIEDPIEM IEPAFNQTQV QPVLDLGFAE
GLRALMRQDP DIIMVGEIRD LETAEMAIQA ALTGHLVFST LHTNDAAAAV TRLTDLGVPP
YLIGATVIGV LAQRLVRTLC PSCKQPDDSA AGREVLDEAI RPWKLNGEYR PCKPVGCLEC
RHTGYRGRAG LYELLELNDA LQSSIHPHYD AGALRRQAVK QGLQPLRLAG AMKVAQGLTT
IDEVLRATPR WEA
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