| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3042 |
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| Symbol | |
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| ID | 4784964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3233118 |
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| End bp | 3233819 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640091613 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_001022230 |
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| Protein GI | 124268226 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.412823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCT CGCAGGTGTT GTTCTCCCAG GGTTTCGGCA CCCGGCGCGA CTGCGCCGGG
CTCATCCACG CAGGCGCCGT CGAGGTGGCC GGGCGCGTGG TCGACGACCC CGACGAGGAG
CTGCCGACCG AGGACCTGGT GTTCAGCGTG CAGGGCCGGG CCTGGCCCTT CCACGACAAG
GCGCTGGTGC TGCTGCACAA GCCCACCCAC TACGAGTGCT CGCAGAAACC GCGCCACCAT
CCCGGCGTGC TCTCGCTGCT GCCGACGCCG CTGCGCGTGC GCGGTCTGCA GCCGGTCGGA
AGGCTCGACG AAGACACCAC CGGCGCGTTG CTGCTCACCG ACGACGGCAC GCTCATCCAC
CGGCTCACAT CACCCAAGCA CCACGTGCCC AAGGTCTACG AGATCACGGC CAAGCATGCG
CTGGCCGACG AGCAGATCGC CCGCCTGACC GAGGGCGTGG TGCTCGACGA CGATCCCCAG
CCGGTGCGCG CGGCCGCGGC CGAACGCACC GGCGAATTCA CGCTGCGCCT CACGCTGACC
GAAGGCAAGT ACCACCAGGT CAAGCGCATG CTGGCGGCGG TAGGCAACCG CTGCGAGGCG
CTGCACCGCA GCCGCATCGG CGCGCTGGCC CTGGACGACC TCCCGGTCGG CCAGTGGCGC
TGGGTCGGCC CGGACGAGCG GGCCCGGCTG CTGCAGAAGT AG
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| Protein sequence | MRISQVLFSQ GFGTRRDCAG LIHAGAVEVA GRVVDDPDEE LPTEDLVFSV QGRAWPFHDK
ALVLLHKPTH YECSQKPRHH PGVLSLLPTP LRVRGLQPVG RLDEDTTGAL LLTDDGTLIH
RLTSPKHHVP KVYEITAKHA LADEQIARLT EGVVLDDDPQ PVRAAAAERT GEFTLRLTLT
EGKYHQVKRM LAAVGNRCEA LHRSRIGALA LDDLPVGQWR WVGPDERARL LQK
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