| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3040 |
|---|
| Symbol | |
|---|
| ID | 4784962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3230470 |
|---|
| End bp | 3231123 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640091611 |
|---|
| Product | peptidase |
|---|
| Protein accession | YP_001022228 |
|---|
| Protein GI | 124268224 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3577] Predicted aspartyl protease |
|---|
| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCG CACTGCTGTC GGCCGTGCTG ATCCTCGCCG CGGCCGGGGC GGCGGCGCAG
CAGCCCTCAC GTCGCGTGGC CCTGAGCGGC AGCATGGGCA GCCGCGCGCT GCTGGTGATC
GACGGCGATG CGCCACGCGC GGTGGCGGTG GGCAGCACCG TGCAGGGCGT CAAGTTGCTC
AGCGTGAACG AGGCGCAGGC GGTGGTCGAG ATCGACGGCC GGCGGCAGAC GCTGCGCCTC
GGCGAAGCGG CGGTGAACCT GGGCGGCGCG GCCAGCGCCG GCAGCGGCAC CCAGATCACC
CTCAGCAGCG ACGCCAACGG CCACTTCCAG GCCCAGGGCC AGATCAACGG CCGTGGCGTG
CTGTTCCTGG TGGACACCGG CGCGACCATG ATTTCGATGG GGCAGGACGA GGCCGAGCGC
CTGGGCCTGG CCTACAAGAA CGGCGAGCGC ATCGGCCTGC GCACCGCCAA CGGCAACACC
GTGGGCTACC GCATCTCGCT GAACACGGTG CGGGTCGGTG ACGTCGAGGT GCACAACGTG
GCGGCGGTGG TGCAGCCCCA GCCGATGCCC TTCATCCTGC TCGGCAACAG CTTCCTGACG
CGCTTCCAGA TGAAGCGCGA GAACGACACG CTGCTGCTGC AGCGGCGCTA CTGA
|
|---|
| Protein sequence | MRAALLSAVL ILAAAGAAAQ QPSRRVALSG SMGSRALLVI DGDAPRAVAV GSTVQGVKLL
SVNEAQAVVE IDGRRQTLRL GEAAVNLGGA ASAGSGTQIT LSSDANGHFQ AQGQINGRGV
LFLVDTGATM ISMGQDEAER LGLAYKNGER IGLRTANGNT VGYRISLNTV RVGDVEVHNV
AAVVQPQPMP FILLGNSFLT RFQMKRENDT LLLQRRY
|
|---|
| |