| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2961 |
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| Symbol | |
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| ID | 4783565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3141515 |
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| End bp | 3142111 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640091532 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001022149 |
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| Protein GI | 124268145 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0346272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG TGTCCGCCTT GCTCGAAACC TTGCGCCCGC AGTTGCTGCG CTATGCGCAA
CTGCAGTTGC GCAATCCGGC CTGGGCCGAG GACGCGGTGT CGGAGACGAT ACTGGCCGCA
CTCGAGAAGC CGGAGGCCTT TGCCGGCCGC GCCGCGCCGA AGACCTGGCT GATCGGCATC
CTGAAGCACA AGCTGGTCGA CCAGGTGCGT CGGCATGCGC GCGAGTGCTC GATGACGAGC
GACGAAGACG ACGGCGCAAC GCTCGAAGAA CAGCTGTTCG ACGAAACGGG CCACTTCCGC
GACGCCCCGA TCGAATGGGG CGACCCACAG GCGATCGTGG CCCAGGATCA GTTCATCAAA
GTGCTCGACG CCTGCATCGA GAAACTGCCC AACCAGCTCG GCCGCGTGTT CCTGATGCGC
GAGTGGATGG AACTCGAAAC TGACGAGATC TGTAAGGAAC TGTCGGTCAC GCCGACGAAC
CTCTGGGTCA TGCTGCACCG GGCCCGGTTG AGGCTGCGGG AATGCCTGCA ACTCAACTGG
TTCGGCGAGC CCGCCCTCGC TCTGTCTTCC GTCCCGCCCG CCCCGAAGCG CCGATGA
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| Protein sequence | MTDVSALLET LRPQLLRYAQ LQLRNPAWAE DAVSETILAA LEKPEAFAGR AAPKTWLIGI
LKHKLVDQVR RHARECSMTS DEDDGATLEE QLFDETGHFR DAPIEWGDPQ AIVAQDQFIK
VLDACIEKLP NQLGRVFLMR EWMELETDEI CKELSVTPTN LWVMLHRARL RLRECLQLNW
FGEPALALSS VPPAPKRR
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