| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2945 |
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| Symbol | |
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| ID | 4784367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3129125 |
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| End bp | 3130258 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640091516 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
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| Protein accession | YP_001022133 |
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| Protein GI | 124268129 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.308667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTCA CCCCCTCCGA ATCCTGGGCG CTCGCGCTGC GCAACGCCAA CGAAGCCATC
GGCCTGTCCG ATCCCAACCC CCGGGTCGGC TGCGTCATCA CCGCCCCCGA CGGTCGCCTG
CTGGCCAGTG GACACACGCA GCGCGCCGGC TCGGCGCACG CCGAGGTGTC GGCACTGCGT
GCGGCGCAGG CCGCGGGCCA CACGGTGCGC GGCGGCACCG CCTGGGTCAC GCTCGAGCCC
TGCTCGCACC ACGGCCGCAC CCCGCCCTGC TGCGATGCGC TGGTCGAGGC CGGCGTGGCC
CACGTGATGG TGGCGCTGCA GGACCCGAAT CCGCTGGTCG CCGGTCACGG CATCGGCCGG
CTGCGGGCGG CCGGCATCGA CGTGACGGTG CTGGCGCCCG GCGACCCGGT TGCAATCGCC
GCGCGCGAGC TGAATATCGG CTTCCTCTCC CGCATGCTGC GCCAGCGGCC GTGGGTGCGC
CTGAAGATCG CCGCGTCGCT CGACGGACGC ACGGCACTCG ACAACGGCCT GAGCCAGTGG
ATCACCGGCG ATGCCGCCCG CACCGACGGC CACGCCTACC GCAAGCGGGC CGGGGCGGTG
CTCACCGGCA TCGGCACCGT GATCGACGAC GACCCGCGGC TCGACGTGCG GCTCGTCGAC
ACCGTGCTGC AGCCGTGCCG GGTCGTCGTC GACTCCAAGC TCGACATCGC GCTCGACGCC
CGCATCCTCT CGCCACCGGG CGAGCGGCTG GTCTACACGG CCAGTGCACT GGCCCGCCAT
GCGGCGCCGA AGGTCCGTGA ACTGGCCGAA CAGGGCGTGT CGGTGCTGGC CTGTGCCAAC
GCCGACGGCA AGGTCGATCT GGGCGCGATG CTCGACGACC TGGCGCGGCG CGAGATCAAC
GAACTGCATG TCGAGGCGGG CAGCAAGCTC AGCGGCTCCT TCGTGCGGGC GGGCCTGGTC
GACGAGTTCC TCGTCTACCT GGCGCCGCTG ATGCTCGGTG CGGGTCGCGA GATGGCGCGC
TTCGGTCCGC TCACTGCACT GACCGAGGGC CTGGCGCTCG AGTTCGTCAG TGTCGAGCGC
GTCGGGGCTG ATCTGCGCCT GATCGCCCGG CCGCCGGGCC GTGCCGATTT CTGA
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| Protein sequence | MKLTPSESWA LALRNANEAI GLSDPNPRVG CVITAPDGRL LASGHTQRAG SAHAEVSALR
AAQAAGHTVR GGTAWVTLEP CSHHGRTPPC CDALVEAGVA HVMVALQDPN PLVAGHGIGR
LRAAGIDVTV LAPGDPVAIA ARELNIGFLS RMLRQRPWVR LKIAASLDGR TALDNGLSQW
ITGDAARTDG HAYRKRAGAV LTGIGTVIDD DPRLDVRLVD TVLQPCRVVV DSKLDIALDA
RILSPPGERL VYTASALARH AAPKVRELAE QGVSVLACAN ADGKVDLGAM LDDLARREIN
ELHVEAGSKL SGSFVRAGLV DEFLVYLAPL MLGAGREMAR FGPLTALTEG LALEFVSVER
VGADLRLIAR PPGRADF
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