Gene Mpe_A2941 details

Gene Information

• Locus tag: Mpe_A2941
• Symbol: pilE
• ID: 4784363
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylibium petroleiphilum PM1
• Kingdom: Bacteria
• Replicon accession: NC_008825
• Strand: +
• Start bp: 3125549
• End bp: 3125977
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640091512
• Product: fimbrial biogenesis protein
• Protein accession: YP_001022129
• Protein GI: 124268125
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.639478
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGCCCC GCCCGGGCAT GATCGCCGCA CGCGGTCTGA GCCTCGTCGA ACTGGTGATC 
GTGCTGCTTG TCGTCGGCAT CCTCGCGGTG ATCGCCTATC CCAGCTTCAT GGCGCAGTTG 
CTCAAGACCC GCCGCATCGA GGCCATCGCC GCGCTGGCCC AGGTACAGCA GGCTCAGGAA 
CGCTGGCGCG CGAATCACAC GACGTATGCC GACACCCTCG CGGCGCTCGG TCTGTCGTCG 
CCCGCGTCCG GCCGCTACCT GATCACGATC GACCACGGCG CGGTCGACGG CTACACGGCC 
ACGGCCCGTG CCGTCGGTGC GCAAGCGGTC GACACGGCCT GCACCAGCCT GAGTCTCACG 
CTGGGCGGCG GCACCACCCG CCACGCATCG ACCGGCTCCG CGCTCGCAAG CGTCTGCTGG 
AACCGGTGA 

 

Protein sequence

MAPRPGMIAA RGLSLVELVI VLLVVGILAV IAYPSFMAQL LKTRRIEAIA ALAQVQQAQE 
RWRANHTTYA DTLAALGLSS PASGRYLITI DHGAVDGYTA TARAVGAQAV DTACTSLSLT 
LGGGTTRHAS TGSALASVCW NR