Gene Mpe_A2939 details

Gene Information

• Locus tag: Mpe_A2939
• Symbol: nrdR
• ID: 4784361
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylibium petroleiphilum PM1
• Kingdom: Bacteria
• Replicon accession: NC_008825
• Strand: +
• Start bp: 3124436
• End bp: 3124879
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640091510
• Product: transcriptional regulator NrdR
• Protein accession: YP_001022127
• Protein GI: 124268123
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.634156
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCGCTGCC CCTTCTGCGG CCACGAGGAC ACCCAGGTCG CCGAGACCCG GGAGTCCGAC 
GAAGGCGACG TGATCCGTCG CCGGCGTCGC TGCCCGTCCT GTGACAAGCG CTTCACGACC 
TACGAGCGCG CCGAGCTGGC AATGCCGGCG ATCGTGAAGA AGGATGGCAG CCGCAGCGAA 
TTCGATCGCA GCAAGATCCG CGCGTCGATG ATGCTGGCGC TGCGCAAGCG GCCTGTGAGC 
ATCGACCAGG TCGAGGCCGC CCTCGGGCGC ATCGAGGAGA AGATGCTCGC CACCGCCGCC 
AACGAGGTGC CGTCCGCGAA GATCGGCGAG ATGGTGATGC GCGAGCTGAA GAAGCTCGAC 
AAGGTGGCTT ACGTGCGCTT CGCGTCGGTG TACCGGAGCT TCGAGGGCGT CGACGAATTC 
AGCCGCCTCA TCAAGGACAT TTGA 

 

Protein sequence

MRCPFCGHED TQVAETRESD EGDVIRRRRR CPSCDKRFTT YERAELAMPA IVKKDGSRSE 
FDRSKIRASM MLALRKRPVS IDQVEAALGR IEEKMLATAA NEVPSAKIGE MVMRELKKLD 
KVAYVRFASV YRSFEGVDEF SRLIKDI