| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2929 |
|---|
| Symbol | |
|---|
| ID | 4784351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3112264 |
|---|
| End bp | 3114513 |
|---|
| Gene Length | 2250 bp |
|---|
| Protein Length | 749 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640091500 |
|---|
| Product | putative dehydrogenase, large chain oxidoreductase protein |
|---|
| Protein accession | YP_001022117 |
|---|
| Protein GI | 124268113 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.158131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCG CACTCGTCGC CAAACGCCTC GCCGGCCAGT CGCCGGCCCT CGATACCGAC
GCCCGCTCCG GCGAATTCGA CCGCCGTGGC TTCCTCAAGC TCAGTGCGCT CGGCGGTGGC
GGGCTGGCCG TCACCTGGTC GGCACCGGCC GCGCTGGCGG CCGAGGAGGG CGCGCCCGCC
GCGCCGAAGA AGCCGGTCGA CCCCAGCCCC TTCATCAAGA TCCATCCCGA CGACACGGTG
GAGATCCGCG TCAACCGGCT CGACTTCGGC CAGGGCGCGC TGACCGCGCT GCCGATGCTG
GTGGCCGAGG AGCTCGACGT CGACTGGAAG CAGGTGCGCG CCAGCCTCGC GCCGGCAGGC
GAGGCCTACA AGGACCCGCT GTTCGGCATC CAGATGACCG GCGGCTCCAG CGCGGTGCCG
AACTCCTGGC TGCAGTACCG TCAGGTCGGC GCGGCCACCC GCATGATGCT GGTCGCAGCG
GCCGCCGCGC AGTGGAAGGT GCCGGCCGAG GCCTGCAGTA CCGAGGCCGG CGTGGTGCGC
CATGGCAGCA AGCGGGCGAC CTACGCCTCG CTGGCTGCCG CGGCGGCGAA GCAGCCGGTG
CCGTCGAGCG TGGCGCTGAA GGCGCCGGCC GACTACCGCA TCATCGGCCA CGGCAAGGGC
CGCATCGACG CGGTCGCCTC CGTGTCGGGC AAGAAGCGCT ACGGCATCGA CCACCGCCTG
CCGGGCATGA AGGTCGCGCT GCTGCAGCGG GCGCCGACCT TCGGTGGTCA GGTCGAGAGC
TTCGACGCAA GCAAGGCGAA GGCGATCAAG GGCGTGATCG ACGTGTTCCA GGTGTCGACC
GACCGCGGCG GCACGGGCTT GGCCGTCATC GCCGACGGCT ACTGGCCCGC CAAGCAGGGC
CGCGAGGCGT TGCAGGTGAA GTGGAAGCCA GGTGTCGGCG GTACGGTCAG CAGCGACAAG
CTGCTGGCCC AGTACCGCGA CGAGGCCAAG GCGCCGAAGC TCACGGCTCT CGCCGGTGAC
GGCGCCGCGA TCGAGGCCGC CGCGAAGGCG GCGCCGAAGA AGATCAGCGC CGAGTACGAA
TTCCCCTACC TCGCACACGC GCCGATGGAG CCGCTGAACG CGACCTTCGA ACTGAAGGCC
GATCGCGCCA TCGTGTGGGC GGGCACGCAG TTCCAGACCG TCGACCAGAC GGCGATCGCG
CAGACGCTGG GCCTCAAGCC CGAGCAGGTG ACGCTGAACA CGCTGCCGGC CGGCGGCGGC
TTCGGGAGGC GCGCGGTCCC GAGCTCGGAC TACCTGCGCG AGGCCGCCGG CATCGCCAAG
GCCTGGCACG CCAAGGATCC CAAATCGCCG TTGATGGTGA TGTGGAGCCG CGAGGACGAC
ATCAAGGGCG GCAACTACCG GCCGGCTCAC CTGCACCATG TCGATATCGC GCTCGACGCG
CAGGGGCAGG TGCAGGGCTG GGACCACGTG ATCGTCGGCC AGTCGCTGGT GAAAGGCACG
CCGTTCGAGT CCTTCCTGGT CAAGGATGGC ATCGACCACA CGATGACCGA GGGCGTGGTC
GAGAACACCT ATGGGATGCC GATGCGGCTG CGCGCCACGC ACCCGGACGT CGCAGTGCCG
GTGCTGTGGT GGCGCTCGGT CGGCCACACC CACACCGGCT TCGTGATGGA GACGCTGGCC
GATGAGGTGG CGCGTGCGGC GGGCCAGGAT CCGGTGGCCT GGCGGCTCGC GAAGCTCGAC
CCGAAGAAGC ACGCGCGCCA CGTGGCCGCA CTGAAGCTCG CGGTCGACAA GTCGGGCTAC
GGCAAGTCCC TCCCGGCCGG CCATGCCTGG GGTGTGGCGG TGCACGAGTC CTTCGGCTCG
GTGGTGGCCT ACGTGGTCGA CGTTTCCCTC ATCGACGGCC GACCGAAGGT GCATGCGGTC
ACGGCCGGCG TGCATGCCAA CCAGGTCGTC AACCCGACGG CGGCCGAGGC GCAGATCCAG
GGCGGCGCGG TGTTCGGCCT GTCGATGATC CAGCCGGGCT TCGCGATCAC GCTGAAGGAC
GGCGTCGTGG AGCAAAGCCA GTTCAGCGAC TTCGCACCAC CGCGCATCAC GGATGCGCCG
CCGGTGGCGG TGCATTTCGT GCCGAGCAAC GATCCACCCA CCGGCCTGGG CGAACCCGGC
GTGCCGCCGA TCGCGCCGGC GGTGGCCAAT GCCGTCGCGG CGCTGACCGG CAAGCGCCTG
CGCAAGCTGC CTTTCGAGGC ACTGGCCTGA
|
|---|
| Protein sequence | MDFALVAKRL AGQSPALDTD ARSGEFDRRG FLKLSALGGG GLAVTWSAPA ALAAEEGAPA
APKKPVDPSP FIKIHPDDTV EIRVNRLDFG QGALTALPML VAEELDVDWK QVRASLAPAG
EAYKDPLFGI QMTGGSSAVP NSWLQYRQVG AATRMMLVAA AAAQWKVPAE ACSTEAGVVR
HGSKRATYAS LAAAAAKQPV PSSVALKAPA DYRIIGHGKG RIDAVASVSG KKRYGIDHRL
PGMKVALLQR APTFGGQVES FDASKAKAIK GVIDVFQVST DRGGTGLAVI ADGYWPAKQG
REALQVKWKP GVGGTVSSDK LLAQYRDEAK APKLTALAGD GAAIEAAAKA APKKISAEYE
FPYLAHAPME PLNATFELKA DRAIVWAGTQ FQTVDQTAIA QTLGLKPEQV TLNTLPAGGG
FGRRAVPSSD YLREAAGIAK AWHAKDPKSP LMVMWSREDD IKGGNYRPAH LHHVDIALDA
QGQVQGWDHV IVGQSLVKGT PFESFLVKDG IDHTMTEGVV ENTYGMPMRL RATHPDVAVP
VLWWRSVGHT HTGFVMETLA DEVARAAGQD PVAWRLAKLD PKKHARHVAA LKLAVDKSGY
GKSLPAGHAW GVAVHESFGS VVAYVVDVSL IDGRPKVHAV TAGVHANQVV NPTAAEAQIQ
GGAVFGLSMI QPGFAITLKD GVVEQSQFSD FAPPRITDAP PVAVHFVPSN DPPTGLGEPG
VPPIAPAVAN AVAALTGKRL RKLPFEALA
|
|---|
| |