| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2812 |
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| Symbol | |
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| ID | 4785385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2996104 |
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| End bp | 2997246 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640091383 |
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| Product | HypD' protein |
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| Protein accession | YP_001022001 |
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| Protein GI | 124267997 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.33874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTACA TCGACGAGTT TCGCGACGGC GGCGTCGCCC AGAAGATCGC CGAGCGGCTG
CGCCAGGAGG TTCGTCCGAA CCGCAGCTAC AGCTTCATGG AGTTCTGCGG CGGCCACACC
CACGCCATCT CGCGTTATGG CGTCAGCGAG CTGCTGCCGG CCAATGTGCG CATGGTGCAC
GGTCCAGGCT GCCCGGTCTG CGTGCTGCCG ATCGGCCGCA TCGACCTGGC GATCAAGCTC
GCACTCGAGC GTGGAGCCAT CGTCTGTACC TACGGCGACA CCATGCGCGT GCCGGCGTCC
GACGGCCTGT CGCTGGTTCG TGCCAAGGCG CGCGGTGGCG ACATCCGCAT GGTGTACTCG
GCGGCCGATG CGCTCCAGAT CGCGCGCCAG AACCCGCAGC GCGAGGTGGT GTTCTTCGCG
ATCGGCTTCG AGACGACCAC GCCGCCCACG GCCCTGGCGA TCCGCGACGC CCACAAGGAG
GGGCTGGCGA ATTTCAGCGT GCTGTGCTGC CATGTGCTCA CGCCGTCGGC GATCACGCAC
ATCCTCGAGT CGCCCGAAGT ACGGCAGTTC GGCACGGTGC CGATCGATGG CTTCGTGGGG
CCGGCACACG TCAGCATCGT GATCGGTTCC GGACCCTACG AGCACTTCGC ACAGGAGTAC
CGCAAGCCGG TGGTCATCGC CGGCTTCGAG CCGCTCGACG TGATGCAGGC GGTGCTGATG
CTCGTGCGCC AGGTGAACGA AGGGCGCGCC GAGGTCGAGA ACGAGTTCAC CCGTGCGGTC
AACCGCGACG GCAACCTGAA TGCGCAGGCG CTGGTGTCCG ACATCTTCGA GCTGCGGCCG
AGTTTCGAGT GGCGTGGCCT CGGTGAAGTG CCGTACAGCG CGCTCAAGAT CCGCCCCGGC
TTCGCCGCCT TCGATGCCGA GCGGCGCTTC CAGCTCGGCT ACCAGCCGGT GGCCGACAAC
AAGGCCTGCG AATGCGGCGC CATCCTGCGC GGTGTGAAGA AGCCGACCGA CTGCAAGATC
TTCGGCACGG TGTGCACGCC GGAGAATCCG GTGGGGTCCT GCATGGTGTC CAGCGAGGGC
GCCTGCGCGG CGCACTACTC CTACGGGCGG TTCAAGGACA TCGCGATCGT GGCGGCAGCA
TGA
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| Protein sequence | MKYIDEFRDG GVAQKIAERL RQEVRPNRSY SFMEFCGGHT HAISRYGVSE LLPANVRMVH
GPGCPVCVLP IGRIDLAIKL ALERGAIVCT YGDTMRVPAS DGLSLVRAKA RGGDIRMVYS
AADALQIARQ NPQREVVFFA IGFETTTPPT ALAIRDAHKE GLANFSVLCC HVLTPSAITH
ILESPEVRQF GTVPIDGFVG PAHVSIVIGS GPYEHFAQEY RKPVVIAGFE PLDVMQAVLM
LVRQVNEGRA EVENEFTRAV NRDGNLNAQA LVSDIFELRP SFEWRGLGEV PYSALKIRPG
FAAFDAERRF QLGYQPVADN KACECGAILR GVKKPTDCKI FGTVCTPENP VGSCMVSSEG
ACAAHYSYGR FKDIAIVAAA
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