| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2723 |
|---|
| Symbol | |
|---|
| ID | 4783740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2893487 |
|---|
| End bp | 2894128 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640091294 |
|---|
| Product | transcription elongation factor |
|---|
| Protein accession | YP_001021912 |
|---|
| Protein GI | 124267908 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.503911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTGG TGCAGGGAAG GCATTTTCAA CCGAATGTCC GGGCTTGCTC ATTCCGCGGC
GACGCGCGTG AGAATGATGG CATGAGCAAG GCCTTCACGA AGGAAAGCGA CGCGCCTGAC
GAGGACGACG AGCTCGAGCT GCCCGCCTTG CCGGCCGGCA GCAAGAACTA CATCACGCCG
GCGGGCTTCG CCCGCTTGCG GGCCGAGTTG ATGCAACTGC TCGACGACGA ACGTCCCAAG
GTGGTCGAGA CCGTGTCCTG GGCCGCGAAG AACGGCGACC GCTCCGAGAA CGGCGACTAC
CTCTATGGCA AGAAGCGGCT GCGCGAGATC GACCGCCGCA TCCGCTTCCT GACGAAGCGA
CTCGAGATCG CCGAGGTGGC CGACCCCAGC GTGCATCGAG GCAGCGACCA GGTGTTCTTC
GGCGCGACCG TCACCTACGC GGCCCCCGAC GGCGTCGAGC GCACGATCAC GATCAAGGGC
ATCGACGAGG CCGACAACCT GCAGGCCGAG GTGAGCTGGA TCTCGCCGGT GGCGCGGGCA
CTGTTGAAGG CGCGTGTGGG CGACGAGGTC ACGCTGCTCA CGCCGCAGGG GCCGCAGACG
ATCGAGGTGA TCGAGGTGCG CTACCCACCC CGACCGGCTT GA
|
|---|
| Protein sequence | MEVVQGRHFQ PNVRACSFRG DARENDGMSK AFTKESDAPD EDDELELPAL PAGSKNYITP
AGFARLRAEL MQLLDDERPK VVETVSWAAK NGDRSENGDY LYGKKRLREI DRRIRFLTKR
LEIAEVADPS VHRGSDQVFF GATVTYAAPD GVERTITIKG IDEADNLQAE VSWISPVARA
LLKARVGDEV TLLTPQGPQT IEVIEVRYPP RPA
|
|---|
| |