| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2664 |
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| Symbol | |
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| ID | 4784026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2836823 |
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| End bp | 2840014 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640091235 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001021853 |
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| Protein GI | 124267849 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.180042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCT CCCATCCCTT CAGTCGCCTG CTGGCCCGTC TGAGCGTCGG CCGCAAGCTG
ATGCTGATCT ACCTGCTGGA CCTCACGGCG GTGATCTTCG TCAGCAGCAT CCTGATCAAC
GAGAAGTTCA TCGCGATCGA CTTCGCACGC AAGGAGATCG CCGGCAACGC CTACATCGCG
GGCATGCGCG ATGGCCTGAT CGAGGCCGCC CTGGGGCCGG ACGCGAGCGG GGCGGCGGCA
CGCACGGACC ACCGGGCGGC GCTGGCGCTC GCCGAGCGGC AGCACGGTGC GGGCATGCAG
AGCGAGGAGC CGAGCCTCGC GCTGGCCACC GCCTACGGTG TGCTGGCCAC GGCCGGACCG
GGCGACCGCG GCAAGGCGCA GTCGGACGTG CTGGCGCGCG GGCGCGACCT GATCACGCGG
GTCGGCAACC AGTCCAACCT GATCCTGGAC CCCGACCTCG ACAGCTACTA CACGATGTCG
CTGATCGTGC TGCGCTACCC GGAGCTGCTC GAGACCATCG ACGGCATCGG CGCGCAGCTG
GCGGCCCAGG TCAGCGCGGG GGCCGGCCTG GCCGAGGCCC GCACGCAGTA CCTCATCCTC
GAAGGCAAGC TCGACGCGAC CCGCCAGGGC ATCGACACCG ACCACAGCGA GGCCTACGCG
GCCGGCGGAC CGGCGCTGAA GGCCCAGCTC CGGCCGGCCC AGGCCAAGCT GCAGGCTGCG
CTGGAGGCCT ATCGGCGCAG CGCGCGCCTG CTGTTCGACA GCGGCGCCAC GCCGCAGTCG
CTGGCCGGCG TGCATGTGGC GCAGGCCGGA CTGGTGCGCG AGCTGCAGGT CGCCTGGGCG
GTGGCCGGTG GCGCGATGGA CGGGTTGCTC GACGCGCGTG TCGCGAGCCT CTACCACCGC
ATGTGGATCC ACCTCGGCAC CGCGCTGGCC CTGCTGTGCG CGATCCTCGC GATCGTCTAC
TTCGTGGCCC GGCAGATCGC CATGCCGCTG CGGCATCTGG CCGAGGTGAC CGACACCGTG
CGGCGCACCG GCGACCACAG CCTGCGCGCG CAGTGGAGCA GCAGCGACGA GATCGGCCGC
TTGGTCGTGG GCTTCAACGG CATGCTCGCG CAGCTCGATC AGGAACGCGA GACGCAGAAG
GAACTGGCCG CGAGCGCCCG CGCCGCGGAG GCCCAGCGCG CGCTGGTGGA GGCCACGCCG
ATCCCGCTGG TCGTGACCTC GGTGCCGGGG CACGAGGTGC TGCACGCCAA CCCGCCCGCC
GAGGCCTGGC TGGCTGGTCA TCGCGCCGAT CCGTGGAAGC ACGGTCTCGA TTCGTCGGTG
CGGGCGCGCT TCTTTCAGCA GCTGGCCGAT CGCGGCGCAG TCGACGAATT CGAGGTCCGC
TGGGGCGCCG GGACCGAGCC GGCCTGGGCG GTGCTGTCGG CCCGGCGCGT GCGCTACCAG
GGCCAGGACG CGGTGCTGAC CGCCTTTGCC CCGATCAACC ACCTCAAGCT GATGGAGCGG
CGGCTCGAGC TGTGGGCCAA GGTGTTCGAG GCCTCCAGCG AAGGCATCCT GATCGTCGAT
GCGCAGCGCC GCATCCTGAC CGCCAACCAG GCGTTCTCGC GCCACACCGG CTACGAGCTG
CAGGAGGTGG TGGGGGAGAA GCCGTCCCTG ATGCTGGCCG TGGAGCAGAC CGACGAACAG
AGCGCCGCGT TCTGGCAGAG CGTGTCGAAC CGCGGCACCT GGCAGGGCGA GCTGCAGGTG
CGCCGCCGCA ACGGCAGCGA GTACCCGGCC TGGCTGATGG TGAACGCCGT GCGGCAGTCG
CAGGGCGACA TCTCGCACTA CATCTTCACG TCGATCGACA TCAGCGACCG CAAGAAGAGC
GAGCAGCGCA TCCGCTTCCT GGCCGACCAC GACGTGCTCA CCGAGCTGCC GAACCGCTCG
CTGTGCACCG AGCGGCTGCG CATGGCCGTG CAGCAGGCAC AGCGCAGCGG GCAGCAGGTG
GCGGTGATGT TCATCGACCT CGACCGGTTC AAGGACATCA ACGACTCGCT CGGCCACCAC
ATCGGCGACG GGCTGCTGCG CTCGGTGGCG CGGCGCCTGC TGGAAGCGGT GCGCGCCGGC
GACACCGTCA GCCGGCTGGG CGGTGACGAG TTCGTGATCG TGCTCAACGG CGTGCAGCAC
ATCGACGAGG TCACGCACAT CGTCGACCAG CGGCTGATCC CGCTGATCCG CCAGCCGCAC
CTGGTGGAGG GCGCCGAGCT GCATGTCTCG TGCAGCGTGG GCATCGCCGT CTTCCCGGAC
GATGCCACCG ACATCGACGA GCTGATGAAG CATGCCGACA CGGCGATGTA CCAGGCCAAG
GCCGGCGGCA AGGACGCCGC CGAGTTCTTC ACCGCCGAGA TGACGCAGCG CGCGGAGTCG
CGCATGCAGC TCGACGCCGA CCTGCGGCGT GCGCTCGAGC TGGGACAGTT CGAGCTGCAC
TGGCAGCCGC GCGTGAGCGC GGCCGGCGGC GTGCTGCTCG GCGTGGAAGG CCTGCTGCGC
TGGCAGCACC CGCAGCGCGG GCTGGTCTCG CCGGCGCACT TCATCCCGCT GGCGGAAGAG
ACCGGGCTGA TCGTGCCGAT CGGTGCCTGG GTCATCGAAG AGGCCTGCCG GCAGGTGGCC
GCGTGGCGCG CGCAAGGCCT GCCGTCGTTC GGCGTGTCGA TCAACCTGTC GGCCCGCCAG
CTGCGAGACG ACGGCCTGAC CGACCTGGTG CGCGCCAGCC TGCTGCGGCA CGGTGTGCCG
CCCGGTGTGC TGGAGCTCGA ACTCACCGAG TCGATGGTGA TGGACGACGC CGAGCGCAAC
CTGCGCCAGA TGCACACGCT GCGCGACCTG GGCGTCGGGC TGGCGATCGA CGACTTCGGC
ACCGGCTACT CGAGCCTCGC CTACCTGAAC CGATTCCCGA TCGACAAGCT GAAGATCGAC
CGCTCGTTCG TGCATGACAT GCTGGCCGAT CCGACGGATC GGGCCATCAC GATGGCCATC
ATCGGCCTGG GCCATGCGCT CGGCCTGCAG GTGGTGGCCG AGGGCGTGGA GGAGCCGCGT
GCGGCGGCGC TGCTGCGCGA GGCGCGCTGC GACGAGCTGC AGGGCTACCT GTTCGGGCGG
CCGATGCCGG TGCCGGCCTT CGAGGCCTGG CTGGCCGAAC GCGAGGCGCC GGTCACCCGC
GTGACCGTGT GA
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| Protein sequence | MTISHPFSRL LARLSVGRKL MLIYLLDLTA VIFVSSILIN EKFIAIDFAR KEIAGNAYIA
GMRDGLIEAA LGPDASGAAA RTDHRAALAL AERQHGAGMQ SEEPSLALAT AYGVLATAGP
GDRGKAQSDV LARGRDLITR VGNQSNLILD PDLDSYYTMS LIVLRYPELL ETIDGIGAQL
AAQVSAGAGL AEARTQYLIL EGKLDATRQG IDTDHSEAYA AGGPALKAQL RPAQAKLQAA
LEAYRRSARL LFDSGATPQS LAGVHVAQAG LVRELQVAWA VAGGAMDGLL DARVASLYHR
MWIHLGTALA LLCAILAIVY FVARQIAMPL RHLAEVTDTV RRTGDHSLRA QWSSSDEIGR
LVVGFNGMLA QLDQERETQK ELAASARAAE AQRALVEATP IPLVVTSVPG HEVLHANPPA
EAWLAGHRAD PWKHGLDSSV RARFFQQLAD RGAVDEFEVR WGAGTEPAWA VLSARRVRYQ
GQDAVLTAFA PINHLKLMER RLELWAKVFE ASSEGILIVD AQRRILTANQ AFSRHTGYEL
QEVVGEKPSL MLAVEQTDEQ SAAFWQSVSN RGTWQGELQV RRRNGSEYPA WLMVNAVRQS
QGDISHYIFT SIDISDRKKS EQRIRFLADH DVLTELPNRS LCTERLRMAV QQAQRSGQQV
AVMFIDLDRF KDINDSLGHH IGDGLLRSVA RRLLEAVRAG DTVSRLGGDE FVIVLNGVQH
IDEVTHIVDQ RLIPLIRQPH LVEGAELHVS CSVGIAVFPD DATDIDELMK HADTAMYQAK
AGGKDAAEFF TAEMTQRAES RMQLDADLRR ALELGQFELH WQPRVSAAGG VLLGVEGLLR
WQHPQRGLVS PAHFIPLAEE TGLIVPIGAW VIEEACRQVA AWRAQGLPSF GVSINLSARQ
LRDDGLTDLV RASLLRHGVP PGVLELELTE SMVMDDAERN LRQMHTLRDL GVGLAIDDFG
TGYSSLAYLN RFPIDKLKID RSFVHDMLAD PTDRAITMAI IGLGHALGLQ VVAEGVEEPR
AAALLREARC DELQGYLFGR PMPVPAFEAW LAEREAPVTR VTV
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