Gene Mpe_A2656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2656 
Symbol 
ID4785881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2828404 
End bp2829519 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content71% 
IMG OID640091227 
Productputative acetylpolyamine aminohydrolase 
Protein accessionYP_001021845 
Protein GI124267841 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGC CCACCGCCTT CTTCCACGAC GAACGCTGCC TCTGGCACAG CACCATGGGC 
GGCTTCGCCC TGATCGCACC GGTGGGTGGC TGGGTGCAGC CGCCGGCCGG CGCGGGGCTG
GCCGAATCCC CCGAATCGAA GCGGCGCATG GTGTCGCTGA TGCAGGTCTC CGGGCTCGCG
GACAAGGTCC ACCTGCGCAG CGCGCCGATG GCCACCGAGG AGGACCTGCA GCGCGTCCAT
CCGACGGCCT ACCTGGAGCG CTTCAAGGCG CTGTCCGACC AGGGCGGCGG CGAGATCGGC
CTCTACGCGC CCTTCGGGCC GGGCAGCTAC GAGATCGCCA GGCAGTCGGC CGGCCTCGCG
CTGCATGCGG TCGACGCGGT GCTCTCGGGC GCCCACCGCA ACGCCTATTC GATGTCGCGT
CCGCCCGGCC ACCACTGCCT CGCCGACATG CCGATGGGCT TCTGCCTGCT CGCCAACATC
CCGATCGCGA TCGAGGCCGC ACGCGCGCGC CATGGCGTGA AGCGCATTGC GGTGCTGGAC
TGGGACGTGC ACCACGGCAA CGGCACGCAG TCGATCTTCT ACGAGCGCGA CGACGTGCTG
ACCGTGTCGC TGCACCAGGA AGGCTGCTTC CCGGTCGGCT ACAGCGGTGC ACCCGACCGC
GGCCAGGGCC GCGGCCTCGG CTACAACGTC AACGTGCCGT TGCTGCCGGG CGGCGGGCAC
GACGCCTACC TGTATGCGAT GGAGCGCATC GTGACGCCGG CGATCGACCG CTACCGGCCC
GAGCTCCTCA TCGTCGCCAG CGGCTTCGAC GCCAACGGCG TCGATCCGCT GGCGCGCATG
CTGCTGCACA GCGAGTCCTA CCGCCAGCTG ACCGAGCGGG TGATGGCGCT GGCCGACCGC
CACTGCGGCG GCAGGCTGGT GGTGGTGCAC GAGGGCGGCT ACTCGGAGGC CTGCGTCCCG
TTCTGCGGCC ACGCGGTGGT GGAAACGCTG GCCGGCGAAC GCCTGGGTGT CGAGGACCCG
TTCCTGCACT TCACCGGCGG CCAGCAGCCC AACGAGCGCT ACGCCGCCTT CCAGCGCGGC
CTGATCGACG AGATGGCGGC CGAGTTCGGC TTCTGA
 
Protein sequence
MPLPTAFFHD ERCLWHSTMG GFALIAPVGG WVQPPAGAGL AESPESKRRM VSLMQVSGLA 
DKVHLRSAPM ATEEDLQRVH PTAYLERFKA LSDQGGGEIG LYAPFGPGSY EIARQSAGLA
LHAVDAVLSG AHRNAYSMSR PPGHHCLADM PMGFCLLANI PIAIEAARAR HGVKRIAVLD
WDVHHGNGTQ SIFYERDDVL TVSLHQEGCF PVGYSGAPDR GQGRGLGYNV NVPLLPGGGH
DAYLYAMERI VTPAIDRYRP ELLIVASGFD ANGVDPLARM LLHSESYRQL TERVMALADR
HCGGRLVVVH EGGYSEACVP FCGHAVVETL AGERLGVEDP FLHFTGGQQP NERYAAFQRG
LIDEMAAEFG F